RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TBCEQ15813 527 aaPredicted RBP13.9□□□□□ -0.18
USP47-207ENST00000527733 NKAIN4Q8IVV8 208 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 PIGQQ9BRB3 760 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 SLC22A4Q9H015 551 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 FAM60AQ9NP50 221 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 ANKRD10Q9NXR5 420 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 C4orf47A7E2U8 309 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 KLRC4-KLRK1H3BQV0 150 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 PLOD2O00469 737 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 LILRB5O75023 590 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 F10P00742 488 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 EMX1Q04741 257 aaPredicted RBP13.9□□□□□ -0.18
USP47-207ENST00000527733 EIF3IQ13347 325 aaKnown RBP13.9□□□□□ -0.18
USP47-207ENST00000527733 SIRT6Q8N6T7 355 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 TMIGD2Q96BF3 282 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 A0A087WUU8 490 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 ASPDHA6ND91 283 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 FAM25EA8MYX2 175 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 RBM34P42696 430 aaKnown RBP13.9□□□□□ -0.18
USP47-207ENST00000527733 PLK5Q496M5 336 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 NAXEQ8NCW5 288 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 OR4D9Q8NGE8 314 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 SPTSSAQ969W0 71 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 TAAR9Q96RI9 348 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 NRTNQ99748 197 aa13.9□□□□□ -0.18
USP47-207ENST00000527733 C2orf72A6NCS6 295 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 SLC19A2O60779 497 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 CD14P08571 375 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 ZNF45Q02386 682 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 TGFBR3Q03167 851 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 ZIC1Q15915 447 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 FAM69AQ5T7M9 428 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 PRAMEF17Q5VTA0 474 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 TCTN3Q6NUS6 607 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 ZNF322Q6U7Q0 402 aaPredicted RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 FAM180AQ6UWF9 173 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 PRICKLE2Q7Z3G6 844 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 OR13C3Q8NGS6 347 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 SMOC1Q9H4F8 434 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 CTSFQ9UBX1 484 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 AHCTF1Q8WYP5 2266 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 TCRBV5S2A0A599 114 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 TOX3O15405 576 aaPredicted RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 SLC1A3P43003 542 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 CBX5P45973 191 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 NOVA1P51513 510 aaKnown RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 PNLIPRP2P54317 469 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 UBE2IP63279 158 aaKnown RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 PRSS41Q7RTY9 318 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 TMEM17Q86X19 198 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 SLC43A2Q8N370 569 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 SPRYD4Q8WW59 207 aaPredicted RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 ULBP2Q9BZM5 246 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 SLC6A13Q9NSD5 602 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 EXTL2Q9UBQ6 330 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 YARS2Q9Y2Z4 477 aaKnown RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 MRPS2Q9Y399 296 aaKnown RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 CCDC163A0A0D9SF12 145 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 FRKP42685 505 aaPredicted RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 CCL11P51671 97 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 GMFBP60983 142 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 ZNF704Q6ZNC4 412 aaPredicted RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 CALHM3Q86XJ0 350 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 ERVMER34-1Q9H9K5 563 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 EIF3KQ9UBQ5 218 aaKnown RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 PRKYO43930 277 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 EIF1BO60739 113 aaKnown RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 GATBO75879 557 aaKnown RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 NFATC3Q12968 1075 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 SLX4IPQ5VYV7 408 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 FIP1L1Q6UN15 594 aaKnown RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 DPY19L2P2Q6ZN68 376 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 AKAP14Q86UN6 197 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 LRRC56Q8IYG6 542 aaPredicted RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 OR4F15Q8NGB8 312 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 SLC25A43Q8WUT9 341 aaPredicted RBP13.89□□□□□ -0.19
USP47-207ENST00000527733 SLCO4A1Q96BD0 722 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 MED28Q9H204 178 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 UBQLN3Q9H347 655 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 PLEK2Q9NYT0 353 aa13.89□□□□□ -0.19
USP47-207ENST00000527733 CROCCQ5TZA2 2017 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 MTRF1O75570 445 aaKnown RBP13.88□□□□□ -0.19
USP47-207ENST00000527733 COL28A1Q2UY09 1125 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 C1orf140Q5VVS0 124 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 ABHD12BQ7Z5M8 362 aaPredicted RBP13.88□□□□□ -0.19
USP47-207ENST00000527733 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.88□□□□□ -0.19
USP47-207ENST00000527733 HOXB13Q92826 284 aaPredicted RBP13.88□□□□□ -0.19
USP47-207ENST00000527733 SLC41A2Q96JW4 573 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 H0YC42 278 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 CCNKO75909 580 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 MT-ATP6P00846 226 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 PSKH1P11801 424 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 RAB3BP20337 219 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 BCAP31P51572 246 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 FOXK2Q01167 660 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 SLC25A24Q6NUK1 477 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 DHRS13Q6UX07 377 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 FNDC8Q8TC99 324 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 GPR148Q8TDV2 347 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms