RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 DHRS4L2Q6PKH6 230 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 PATL1Q86TB9 770 aaKnown RBP11.95□□□□□ -0.5
CAPN1-209ENST00000527469 MTDHQ86UE4 582 aaKnown RBP11.95□□□□□ -0.5
CAPN1-209ENST00000527469 RANBP3LQ86VV4 465 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-209ENST00000527469 ZNF295-AS1Q8N0V1 137 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 POU5F2Q8N7G0 328 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 ZNF610Q8N9Z0 462 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 OR8J3Q8NGG0 315 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 RP9Q8TA86 221 aaKnown RBP11.95□□□□□ -0.5
CAPN1-209ENST00000527469 GP6Q9HCN6 339 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 EMC3Q9P0I2 261 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 TMEM181Q9P2C4 612 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 KLHL13Q9P2N7 655 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 DCHS2Q6V1P9 2916 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
CAPN1-209ENST00000527469 TMEM72A0PK05 275 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 ELOA3DA6NLF2 546 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-209ENST00000527469 AIM2O14862 343 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 DNPH1O43598 174 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 EIF1BO60739 113 aaKnown RBP11.94□□□□□ -0.5
CAPN1-209ENST00000527469 PMS2P2O95744 297 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 COX4I1P13073 169 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 PCGF2P35227 344 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 IDUAP35475 653 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 GYS2P54840 703 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 GUSBP1Q15486 140 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 ELOA3BQ3SY89 546 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 PTOV1Q86YD1 416 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 TUSC5Q8IXB3 177 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 SMYD1Q8NB12 490 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 ELOA3Q8NG57 546 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 OR52E4Q8NGH9 312 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 LINC01560Q8TB33 94 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 PIGXQ8TBF5 258 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 RCN3Q96D15 328 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 ARL5BQ96KC2 179 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 NAA11Q9BSU3 229 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-209ENST00000527469 TAPBPLQ9BX59 468 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 TRIM2Q9C040 744 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 KLHL4Q9C0H6 718 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 ADAM19Q9H013 955 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 EVA1AQ9H8M9 152 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 TMEM27Q9HBJ8 222 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 TRAPPC4Q9Y296 219 aa11.94□□□□□ -0.5
CAPN1-209ENST00000527469 ANKRD17O75179 2603 aaKnown RBP11.93□□□□□ -0.5
CAPN1-209ENST00000527469 SH3D21A4FU49 640 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 A8MVM7 634 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 C16orf97H3BN30 126 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 M0QX08 132 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 SMAD9O15198 467 aaKnown RBP11.93□□□□□ -0.5
CAPN1-209ENST00000527469 CYTIPO60759 359 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 CGAP01215 116 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 OPN1SWP03999 348 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 GPIP06744 558 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 GTF2E2P29084 291 aaKnown RBP11.93□□□□□ -0.5
CAPN1-209ENST00000527469 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 VMACQ2NL98 169 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 ERICH5Q6P6B1 374 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 ZNF474Q6S9Z5 364 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-209ENST00000527469 BEND4Q6ZU67 534 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 NET1Q7Z628 596 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-209ENST00000527469 ARPINQ7Z6K5 226 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 GALNT5Q7Z7M9 940 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 ZNF100Q8IYN0 542 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 RASSF5Q8WWW0 418 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 CMTM5Q96DZ9 223 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 LURAP1Q96LR2 239 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 MED18Q9BUE0 208 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 EFCAB1Q9HAE3 211 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 PLSCR4Q9NRQ2 329 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 TESQ9UGI8 421 aaKnown RBP11.93□□□□□ -0.5
CAPN1-209ENST00000527469 AP3M1Q9Y2T2 418 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 CHST2Q9Y4C5 530 aa11.93□□□□□ -0.5
CAPN1-209ENST00000527469 FXYD1O00168 92 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 GPR171O14626 319 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 TPST1O60507 370 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 MFN2O95140 757 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 AHSA1O95433 338 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 IFNA14P01570 189 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 PNMTP11086 282 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 EPXP11678 715 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 DRD4P21917 467 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 UGT2B10P36537 528 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 BNIP2Q12982 314 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 OR7A5Q15622 319 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 DNAJA4Q8WW22 397 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-209ENST00000527469 C3orf49Q96BT1 292 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-209ENST00000527469 DACH2Q96NX9 599 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 PSD2Q9BQI7 771 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 POTEKPQ9BYX7 375 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 ZNF226Q9NYT6 803 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 C6orf203Q9P0P8 240 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-209ENST00000527469 SPG11Q96JI7 2443 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 CCDC168Q8NDH2 2452 aa11.92□□□□□ -0.5
CAPN1-209ENST00000527469 ZC3H12DA2A288 527 aaKnown RBP11.91□□□□□ -0.5
CAPN1-209ENST00000527469 A6NNC1 897 aa11.91□□□□□ -0.5
CAPN1-209ENST00000527469 ZNF724A8MTY0 619 aa11.91□□□□□ -0.5
CAPN1-209ENST00000527469 GSTA4O15217 222 aa11.91□□□□□ -0.5
CAPN1-209ENST00000527469 SNX3O60493 162 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms