RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SNTG1Q9NSN8 517 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 FAM118AQ9NWS6 357 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 BABAM1Q9NWV8 329 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 MTMR10Q9NXD2 777 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 GAR1Q9NY12 217 aaKnown RBP3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 CLEC5AQ9NY25 188 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 RCC2Q9P258 522 aaKnown RBP3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 OPN4Q9UHM6 478 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC25A13Q9UJS0 675 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 IKZF3Q9UKT9 509 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 NDRG4Q9ULP0 352 aaKnown RBP3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 FAM50BQ9Y247 325 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC35A3Q9Y2D2 325 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 ATG4BQ9Y4P1 393 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 SLCO1B1Q9Y6L6 691 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 ZSWIM8A7E2V4 1837 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 TOGARAM1Q9Y4F4 1720 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 CITO14578 2027 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 RGPD2P0DJD1 1756 aa3.4□□□□□ -1.86
CLNS1A-209ENST00000527299 DLEC1Q9Y238 1755 aa3.4□□□□□ -1.86
CLNS1A-209ENST00000527299 SLIT1O75093 1534 aa3.4□□□□□ -1.86
CLNS1A-209ENST00000527299 A0A0G2JLW4 131 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM90A10PA6NDY2 464 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PRORSD1PA6NEY8 169 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ANXA2P2A6NMY6 339 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MYO1GB0I1T2 1018 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SEC14L6B5MCN3 397 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 F5H697 171 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RPL36A-HNRNPH2H7BZ11 118 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SGK494L7N484 410 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GTPBP1O00178 669 aaKnown RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GPR31O00270 319 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CLIC1O00299 241 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 UBDO15205 165 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PMM2O15305 246 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 LYRM1O43325 122 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MED7O43513 233 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TRIAP1O43715 76 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RP2O75695 350 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RHBDL1O75783 438 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 AKAP3O75969 853 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 AKR7A3O95154 331 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 VAMP5O95183 116 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CLDN9O95484 217 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 IFNA21P01568 189 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MT-ND5P03915 603 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 LIPFP07098 398 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SULT1A3P0DMM9 295 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SULT1A4P0DMN0 295 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 C1GALT1C1LP0DN25 315 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ABOP16442 354 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 IL11P20809 199 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 FGF7P21781 194 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CCNOP22674 350 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GADD45AP24522 165 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PRKCHP24723 683 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PTPN3P26045 913 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PRDX5P30044 214 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 HOXA13P31271 388 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 OTX1P32242 354 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 MMP12P39900 470 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PTGER3P43115 390 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RABIFP47224 123 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CAMLGP49069 296 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CEBPDP49716 269 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 FGF8P55075 233 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RPS20P60866 119 aaKnown RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SELENOTP62341 195 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SRSF2Q01130 221 aaKnown RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 YWHAHQ04917 246 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CHRNB3Q05901 458 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 CRYZQ08257 329 aaKnown RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 NPRL3Q12980 569 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 IL24Q13007 206 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 LCP2Q13094 533 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SLAQ13239 276 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 KLF1Q13351 362 aaPredicted RBP3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SEMA5AQ13591 1074 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GAMTQ14353 236 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GRM3Q14832 879 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC10A1Q14973 349 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 RSU1Q15404 277 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 SHBQ15464 509 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PSG3Q16557 428 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 DUOXA1Q1HG43 343 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ISXQ2M1V0 245 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF284Q2VY69 593 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 PTCHD3Q3KNS1 767 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ZRANB3Q5FWF4 1079 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 FNBP1LQ5T0N5 605 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 NCMAPQ5T1S8 102 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 HIST2H3PS2Q5TEC6 136 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 NAPEPLDQ6IQ20 393 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM88Q6PEY1 159 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 C19orf48Q6RUI8 117 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 B3GNT9Q6UX72 402 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 ALKAL1Q6UXT8 129 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 GDPGP1Q6ZNW5 385 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 LANCL3Q6ZV70 420 aa3.4□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM179Q6ZVK1 233 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms