RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 DCTN4Q9UJW0 460 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 SLC35A3Q9Y2D2 325 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 SMIM23A6NLE4 172 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 GUSBP08236 651 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 HNF1AP20823 631 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 ALDH3A1P30838 453 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 RYKP34925 604 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 NR4A2P43354 598 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 SRSF2Q01130 221 aaKnown RBP14.09□□□□□ -0.15
PTPRU-210ENST00000527027 PGS1Q32NB8 556 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 AP1ARQ63HQ0 302 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 WDR93Q6P2C0 686 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 CASP12Q6UXS9 341 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 IL17RELQ6ZVW7 336 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 CLEC4FQ8N1N0 589 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 AGR3Q8TD06 166 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 MIPOL1Q8TD10 442 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 FBXO17Q96EF6 278 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 SLC35G5Q96KT7 338 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 PIMREGQ9BSJ6 248 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 PRR14Q9BWN1 585 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 SLC7A10Q9NS82 523 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 TMEM181Q9P2C4 612 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 SLC9A8Q9Y2E8 581 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 FKBP7Q9Y680 259 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 MALRD1Q5VYJ5 2156 aa14.09□□□□□ -0.15
PTPRU-210ENST00000527027 RNF103-CHMP3A0A140T963 221 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 ATP6V1G2-DDX39BF2Z307 99 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 KIAA0513O60268 411 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 EIF1BO60739 113 aaKnown RBP14.08□□□□□ -0.16
PTPRU-210ENST00000527027 BCAS1O75363 584 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-210ENST00000527027 AGR2O95994 175 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 WNT11O96014 354 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 APEHP13798 732 aaKnown RBP14.08□□□□□ -0.16
PTPRU-210ENST00000527027 PRPS1P60891 318 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 SLC25A3Q00325 362 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 ATAD3BQ5T9A4 648 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 TSPO2Q5TGU0 170 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 TYW3Q6IPR3 259 aaKnown RBP14.08□□□□□ -0.16
PTPRU-210ENST00000527027 EMBQ6PCB8 327 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 CLECL1Q8IZS7 167 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 XAGE5Q8WWM1 108 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 FOXN4Q96NZ1 517 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 SORCS2Q96PQ0 1159 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 NAA11Q9BSU3 229 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-210ENST00000527027 SAP130Q9H0E3 1048 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 OR51I1Q9H343 314 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 POLE3Q9NRF9 147 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 MOKQ9UQ07 419 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 WDR45Q9Y484 360 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 FLVCR1Q9Y5Y0 555 aa14.08□□□□□ -0.16
PTPRU-210ENST00000527027 HEATR1Q9H583 2144 aaKnown RBP14.08□□□□□ -0.16
PTPRU-210ENST00000527027 LOC390937A0A1W2PQ73 354 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 OR12D1P0DN82 309 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 G6PDP11413 515 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 CCNA2P20248 432 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 MPGP29372 298 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 CLDN8P56748 225 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 SLC35A1P78382 337 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 KCNJ10P78508 379 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 SQLEQ14534 574 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 SLC17A1Q14916 467 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 LIPNQ5VXI9 398 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 OR4F3Q6IEY1 312 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 ARFGAP2Q8N6H7 521 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 EPS8L3Q8TE67 593 aaKnown RBP14.07□□□□□ -0.16
PTPRU-210ENST00000527027 UBLCP1Q8WVY7 318 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-210ENST00000527027 PMM1Q92871 262 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 C3orf49Q96BT1 292 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 TUBGCP3Q96CW5 907 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 ZG16BQ96DA0 208 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 MECRQ9BV79 373 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 EXOSC3Q9NQT5 275 aaKnown RBP14.07□□□□□ -0.16
PTPRU-210ENST00000527027 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-210ENST00000527027 PCDHGB4Q9UN71 923 aa14.07□□□□□ -0.16
PTPRU-210ENST00000527027 IGHV4-61A0A0C4DH41 118 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 ERLIN1O75477 346 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 TGFAP01135 160 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 HTR3AP46098 478 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 IDH2P48735 452 aaKnown RBP14.06□□□□□ -0.16
PTPRU-210ENST00000527027 SNRPD2P62316 118 aaKnown RBP14.06□□□□□ -0.16
PTPRU-210ENST00000527027 EMX2Q04743 252 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 KLHL24Q6TFL4 600 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 GSPT2Q8IYD1 628 aaKnown RBP14.06□□□□□ -0.16
PTPRU-210ENST00000527027 RAB8BQ92930 207 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 ROPN1LQ96C74 230 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 DDIT4LQ96D03 193 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 BOD1Q96IK1 185 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 MYOZ1Q9NP98 299 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-210ENST00000527027 MKS1Q9NXB0 559 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 ZDHHC2Q9UIJ5 367 aa14.06□□□□□ -0.16
PTPRU-210ENST00000527027 TMED7-TICAM2A0A0A6YYA0 188 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 RNASET2O00584 256 aaKnown RBP14.05□□□□□ -0.16
PTPRU-210ENST00000527027 KLF11O14901 512 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 ZNF208O43345 1280 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 SKAP2O75563 359 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-210ENST00000527027 IMPDH2P12268 514 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 SERPINB5P36952 375 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 SERPINF1P36955 418 aa14.05□□□□□ -0.16
PTPRU-210ENST00000527027 MAD2L1Q13257 205 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms