RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 NET1Q7Z628 596 aaPredicted RBP17.02■□□□□ 0.32
PKP3-204ENST00000526971 LUZP2Q86TE4 346 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 GTF2IRD2Q86UP8 949 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 PTOV1Q86YD1 416 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 HIPK4Q8NE63 616 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 ROBO4Q8WZ75 1007 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 LRRC58Q96CX6 371 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 REXO5Q96IC2 774 aaKnown RBP17.02■□□□□ 0.32
PKP3-204ENST00000526971 GMPPAQ96IJ6 420 aaPredicted RBP17.02■□□□□ 0.32
PKP3-204ENST00000526971 OR5B2Q96R09 309 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 ELAC2Q9BQ52 826 aaKnown RBP17.02■□□□□ 0.32
PKP3-204ENST00000526971 SPATA5L1Q9BVQ7 753 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 RBM24Q9BX46 236 aaKnown RBP17.02■□□□□ 0.32
PKP3-204ENST00000526971 NANOGQ9H9S0 305 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 GLRX2Q9NS18 164 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 OSGIN1Q9UJX0 560 aa17.02■□□□□ 0.32
PKP3-204ENST00000526971 CSPG4Q6UVK1 2322 aa17.02■□□□□ 0.31
PKP3-204ENST00000526971 RAI1Q7Z5J4 1906 aaPredicted RBP17.02■□□□□ 0.31
PKP3-204ENST00000526971 TMED7-TICAM2A0A0A6YYA0 188 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 FXYD1O00168 92 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 MSTNO14793 375 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 MRASO14807 208 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 PLGP00747 810 aaPredicted RBP17.01■□□□□ 0.31
PKP3-204ENST00000526971 CGAP01215 116 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 PRG2P13727 222 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 TACR3P29371 465 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 CLK1P49759 484 aaKnown RBP17.01■□□□□ 0.31
PKP3-204ENST00000526971 GYS2P54840 703 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 DHRS4L2Q6PKH6 230 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 TMPPEQ6ZT21 453 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 C11orf65Q8NCR3 313 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 RNF128Q8TEB7 428 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 SLC35B4Q969S0 331 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 ZNF607Q96SK3 696 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 SH3GL1Q99961 368 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 SLC39A3Q9BRY0 314 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 RSPO3Q9BXY4 272 aaPredicted RBP17.01■□□□□ 0.31
PKP3-204ENST00000526971 ADAM19Q9H013 955 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 CLEC4AQ9UMR7 237 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 ANGPT4Q9Y264 503 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 TMED7Q9Y3B3 224 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 EMC9Q9Y3B6 208 aa17.01■□□□□ 0.31
PKP3-204ENST00000526971 SH3D21A4FU49 640 aa17■□□□□ 0.31
PKP3-204ENST00000526971 GMNCA6NCL1 334 aa17■□□□□ 0.31
PKP3-204ENST00000526971 DSCAMO60469 2012 aa17■□□□□ 0.31
PKP3-204ENST00000526971 SMNDC1O75940 238 aaKnown RBP eCLIP17■□□□□ 0.31
PKP3-204ENST00000526971 GOSR1O95249 250 aa17■□□□□ 0.31
PKP3-204ENST00000526971 ROS1P08922 2347 aa17■□□□□ 0.31
PKP3-204ENST00000526971 TFPIP10646 304 aa17■□□□□ 0.31
PKP3-204ENST00000526971 CD8BP10966 210 aa17■□□□□ 0.31
PKP3-204ENST00000526971 CCNA2P20248 432 aa17■□□□□ 0.31
PKP3-204ENST00000526971 DRD4P21917 467 aa17■□□□□ 0.31
PKP3-204ENST00000526971 AQP1P29972 269 aa17■□□□□ 0.31
PKP3-204ENST00000526971 CPA2P48052 419 aa17■□□□□ 0.31
PKP3-204ENST00000526971 MAP2K6P52564 334 aa17■□□□□ 0.31
PKP3-204ENST00000526971 COPZ1P61923 177 aa17■□□□□ 0.31
PKP3-204ENST00000526971 NKX6-1P78426 367 aaPredicted RBP17■□□□□ 0.31
PKP3-204ENST00000526971 RNPS1Q15287 305 aaKnown RBP17■□□□□ 0.31
PKP3-204ENST00000526971 WBP2NLQ6ICG8 309 aa17■□□□□ 0.31
PKP3-204ENST00000526971 CLEC9AQ6UXN8 241 aa17■□□□□ 0.31
PKP3-204ENST00000526971 FCRLAQ7L513 359 aa17■□□□□ 0.31
PKP3-204ENST00000526971 SERPINA11Q86U17 422 aa17■□□□□ 0.31
PKP3-204ENST00000526971 PCYOX1LQ8NBM8 494 aa17■□□□□ 0.31
PKP3-204ENST00000526971 OR8J3Q8NGG0 315 aa17■□□□□ 0.31
PKP3-204ENST00000526971 OR10A6Q8NH74 314 aa17■□□□□ 0.31
PKP3-204ENST00000526971 DACH2Q96NX9 599 aa17■□□□□ 0.31
PKP3-204ENST00000526971 NSRP1Q9H0G5 558 aaKnown RBP17■□□□□ 0.31
PKP3-204ENST00000526971 PCNX3Q9H6A9 2034 aa17■□□□□ 0.31
PKP3-204ENST00000526971 BEX4Q9NWD9 120 aaPredicted RBP17■□□□□ 0.31
PKP3-204ENST00000526971 FBN3Q75N90 2809 aa17■□□□□ 0.31
PKP3-204ENST00000526971 PRORSD1PA6NEY8 169 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 SIAH2O43255 324 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 ZNF208O43345 1280 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 SERPINB7O75635 380 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 PRKD3O94806 890 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 ENPP1P22413 925 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 DIO1P49895 249 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 GZMMP51124 257 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 CTBP2P56545 445 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 PCBP3P57721 371 aaKnown RBP16.99■□□□□ 0.31
PKP3-204ENST00000526971 CSNK2A1P68400 391 aaPredicted RBP16.99■□□□□ 0.31
PKP3-204ENST00000526971 RABL3Q5HYI8 236 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 MTDHQ86UE4 582 aaKnown RBP16.99■□□□□ 0.31
PKP3-204ENST00000526971 SLC30A8Q8IWU4 369 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 CIARTQ8N365 385 aaPredicted RBP16.99■□□□□ 0.31
PKP3-204ENST00000526971 CADM2Q8N3J6 435 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 OR6K3Q8NGY3 331 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 RP9Q8TA86 221 aaKnown RBP16.99■□□□□ 0.31
PKP3-204ENST00000526971 ABHD3Q8WU67 409 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 OR11A1Q9GZK7 315 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 FAM107BQ9H098 131 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 OPN3Q9H1Y3 402 aaPredicted RBP16.99■□□□□ 0.31
PKP3-204ENST00000526971 GID8Q9NWU2 228 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 PROCRQ9UNN8 238 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 HDGFL3Q9Y3E1 203 aa16.99■□□□□ 0.31
PKP3-204ENST00000526971 IGHV3-15A0A0B4J1V0 119 aa16.98■□□□□ 0.31
PKP3-204ENST00000526971 TMEM72A0PK05 275 aa16.98■□□□□ 0.31
PKP3-204ENST00000526971 SULT2B1O00204 365 aa16.98■□□□□ 0.31
PKP3-204ENST00000526971 FRS3O43559 492 aa16.98■□□□□ 0.31
PKP3-204ENST00000526971 SNX3O60493 162 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms