RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 NRACQ8N912 160 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 MORN4Q8NDC4 146 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 BLOC1S5Q8TDH9 187 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 MOAP1Q96BY2 351 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 METTL2AQ96IZ6 378 aaKnown RBP5.9□□□□□ -1.46
NEDD8-203ENST00000524927 RILPQ96NA2 401 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 EBNA1BP2Q99848 306 aaKnown RBP5.9□□□□□ -1.46
NEDD8-203ENST00000524927 CRACR2AQ9BSW2 395 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 ACAT2Q9BWD1 397 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 POTEKPQ9BYX7 375 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 FAM129AQ9BZQ8 928 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 LPAR2Q9HBW0 351 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 IL36RNQ9UBH0 155 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 MGAT4BQ9UQ53 548 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 ZNF175Q9Y473 711 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 A0A0G2JMP0 313 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 A0A0X1KG70 313 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 LOC285095A0A1B0GVY8 99 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 PSMD12O00232 456 aaPredicted RBP5.89□□□□□ -1.47
NEDD8-203ENST00000524927 GALR3O60755 368 aaPredicted RBP5.89□□□□□ -1.47
NEDD8-203ENST00000524927 ERAL1O75616 437 aaKnown RBP5.89□□□□□ -1.47
NEDD8-203ENST00000524927 PGM3O95394 542 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 FGF2P09038 288 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 SLC35E2P0CK97 266 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 TNFRSF1BP20333 461 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 IL32P24001 234 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 PON1P27169 355 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 MIPP30301 263 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 RPL3P39023 403 aaKnown RBP5.89□□□□□ -1.47
NEDD8-203ENST00000524927 NSFP46459 744 aaKnown RBP5.89□□□□□ -1.47
NEDD8-203ENST00000524927 STARP49675 285 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 STX17P56962 302 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 KRTAP10-11P60412 298 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 ABATP80404 500 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 ASPHQ12797 758 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 PTPRCAPQ14761 206 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 TRIP10Q15642 601 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 BCL2A1Q16548 175 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 NTRK2Q16620 822 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 PCGF3Q3KNV8 242 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 KBTBD12Q3ZCT8 623 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 SIRPB2Q5JXA9 342 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 TIGD3Q6B0B8 471 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 DCUN1D2Q6PH85 259 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 PHF13Q86YI8 300 aaPredicted RBP5.89□□□□□ -1.47
NEDD8-203ENST00000524927 PLD3Q8IV08 490 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 OR4M2Q8NGB6 313 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 CFAP61Q8NHU2 1237 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 NUBPLQ8TB37 319 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 FIG4Q92562 907 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 DAZLQ92904 295 aaKnown RBP5.89□□□□□ -1.47
NEDD8-203ENST00000524927 TM4SF19Q96DZ7 209 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 URB1-AS1Q96HZ7 61 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 WWOXQ9NZC7 414 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 SPATA7Q9P0W8 599 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 MAN1B1Q9UKM7 699 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 CMAHPQ9Y471 501 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 CLCA3PQ9Y6N3 262 aa5.89□□□□□ -1.47
NEDD8-203ENST00000524927 STARD9Q9P2P6 4700 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 TRBV5-4A0A0C4DH59 114 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 SYCE3A1L190 88 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 H3BNX3 289 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 MFSD11O43934 449 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 ZIC3O60481 467 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 ERLIN1O75477 346 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 LRATO95237 230 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 YEATS4O95619 227 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 GNA14O95837 355 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 HIST1H2ABP04908 130 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 CRYBA1P05813 215 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 PSG1P11464 419 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 SELLP14151 372 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 ANXA7P20073 488 aaKnown RBP5.88□□□□□ -1.47
NEDD8-203ENST00000524927 HIST1H2ADP20671 130 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 PSMA2P25787 234 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 PPP2R1BP30154 601 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 RPA3P35244 121 aaPredicted RBP5.88□□□□□ -1.47
NEDD8-203ENST00000524927 TAS2R40P59535 323 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 RPS15AP62244 130 aaKnown RBP5.88□□□□□ -1.47
NEDD8-203ENST00000524927 CCDC122Q5T0U0 273 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 TYW3Q6IPR3 259 aaKnown RBP5.88□□□□□ -1.47
NEDD8-203ENST00000524927 CFAP77Q6ZQR2 320 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 HIST3H2AQ7L7L0 130 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 IFNEQ86WN2 208 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 ZNF619Q8N2I2 560 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 ZNF786Q8N393 782 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 OR4K2Q8NGD2 314 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 MAGEC3Q8TD91 643 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 SMPDL3AQ92484 453 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 NXNL1Q96CM4 212 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 HBEGFQ99075 208 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 C19orf43Q9BQ61 176 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 SLC30A2Q9BRI3 323 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 OR2B2Q9GZK3 357 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 RBM38Q9H0Z9 239 aaKnown RBP5.88□□□□□ -1.47
NEDD8-203ENST00000524927 HRH4Q9H3N8 390 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 FAM96AQ9H5X1 160 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 PPP1R3EQ9H7J1 279 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 GIMAP4Q9NUV9 329 aa5.88□□□□□ -1.47
NEDD8-203ENST00000524927 KCNK1O00180 336 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms