RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 DOK4Q8TEW6 326 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CT55Q8WUE5 264 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 C10orf82Q8WW14 230 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TSLPQ969D9 159 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 RERGQ96A58 199 aaPredicted RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TM4SF18Q96CE8 201 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 NXPE2Q96DL1 559 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 C19orf60Q96EN9 201 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CMTM7Q96FZ5 175 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 C7orf26Q96N11 449 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 C1orf50Q9BV19 199 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 EBPLQ9BY08 206 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 BARHL1Q9BZE3 327 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CSTL1Q9H114 145 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ELOVL6Q9H5J4 265 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 RABEP2Q9H5N1 569 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF385DQ9H6B1 395 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 FKRPQ9H9S5 495 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 MEAF6Q9HAF1 191 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SLC52A3Q9NQ40 469 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 FGFR1OP2Q9NVK5 253 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 IRAK4Q9NWZ3 460 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ALKBH4Q9NXW9 302 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 PSD3Q9NYI0 1048 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 VPS29Q9UBQ0 182 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 BAIAP2L1Q9UHR4 511 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 FBXW2Q9UKT8 454 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ANGPTL2Q9UKU9 493 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CES1P1Q9UKY3 287 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SNX6Q9UNH7 406 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ERVK-11Q9UQG0 969 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 AMDHD2Q9Y303 409 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ATG4BQ9Y4P1 393 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SLC22A7Q9Y694 548 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 USH1CQ9Y6N9 552 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 MED12Q93074 2177 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 STAB1Q9NY15 2570 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 GTF3C1Q12789 2109 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SHANK1Q9Y566 2161 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ARHGAP21Q5T5U3 1957 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 DNAJC13O75165 2243 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF407Q9C0G0 2248 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 IGKV3D-11A0A0A0MRZ8 115 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 IGHV3-20A0A0C4DH32 117 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 A0A1B0GVY2 172 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 GLOD5A6NK44 160 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 B9A039 149 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 C9JVG2 144 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 E9PBE3 544 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 H0YIG0 161 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 PEX12O00623 359 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 PGRMC2O15173 223 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 HDAC3O15379 428 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 PCDH7O60245 1069 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 PRKNO60260 465 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 KLHL41O60662 606 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 SHOX2O60902 331 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 B4GALT2O60909 372 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 SEC22BO75396 215 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NME6O75414 186 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 SEMA3DO95025 777 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 LRATO95237 230 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 KRT6AP02538 564 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CLPSP04118 112 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 KRT6BP04259 564 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 PRSS1P07477 247 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FHP07954 510 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 IL3P08700 152 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 CT62P0C5K7 136 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FAM58BPP0C7Q3 252 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 C8orf89P0DMQ9 161 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 G6PDP11413 515 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NEFHP12036 1026 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 COX6A1P12074 109 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 BCKDHAP12694 445 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ETFAP13804 333 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 HSD3B1P14060 373 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TCN2P20062 427 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 EFNA1P20827 205 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 AGAP20933 346 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 MAOAP21397 527 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 S1PR1P21453 382 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 RBMS1P29558 406 aaKnown RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 DLSTP36957 453 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 SSR2P43308 183 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 KRT6CP48668 564 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ARFIP1P53367 373 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 AQP5P55064 265 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 MTTPP55157 894 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 NME5P56597 212 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 LINC01547P58512 204 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 STXBP1P61764 594 aaKnown RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 UFM1P61960 85 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 GNGT1P63211 74 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 DCDP81605 110 aaKnown RBP2.67□□□□□ -1.98
CSDE1-208ENST00000524652 TNFRSF17Q02223 184 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 FOLH1Q04609 750 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF33BQ06732 778 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 RGS1Q08116 209 aa2.67□□□□□ -1.98
CSDE1-208ENST00000524652 ASPHQ12797 758 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms