RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 GAB1Q13480 694 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 DAG1Q14118 895 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SERTAD2Q14140 314 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 TATDN3Q17R31 274 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 CBWD6Q4V339 395 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 CBWD3Q5JTY5 395 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 CBWD5Q5RIA9 395 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SYT6Q5T7P8 510 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ADNP2Q6IQ32 1131 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 DENND1BQ6P3S1 775 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 PAQR3Q6TCH7 311 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SCIMPQ6UWF3 145 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 LCLAT1Q6UWP7 414 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF562Q6V9R5 426 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 Q6ZPB1 254 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 GPRIN1Q7Z2K8 1008 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SYT9Q86SS6 491 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 LSRQ86X29 649 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM25Q86YD3 366 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 VRK3Q8IV63 474 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 NRMQ8IXM6 262 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 PGAM4Q8N0Y7 254 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 WDTC1Q8N5D0 677 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 FADS6Q8N9I5 356 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 PXT1Q8NFP0 134 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 OR5R1Q8NH85 324 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 COQ8AQ8NI60 647 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 XAGE5Q8WWM1 108 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SELENOMQ8WWX9 145 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM234Q8WY98 164 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 PPP1R16AQ96I34 528 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 LRR1Q96L50 414 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ALKBH3Q96Q83 286 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 OR52B2Q96RD2 323 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 IL12RB2Q99665 862 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 GABRG3Q99928 467 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 MYOCQ99972 504 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 FUZQ9BT04 418 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 CHRDL1Q9BU40 450 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 NKX6-2Q9C056 277 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ZNF436Q9C0F3 470 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ARV1Q9H2C2 271 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 FN3KQ9H479 309 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 TMEM38AQ9H6F2 299 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 WDR55Q9H6Y2 383 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 PPP1R3EQ9H7J1 279 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 WDR54Q9H977 334 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 EML4Q9HC35 981 aaKnown RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 HRASLSQ9HDD0 168 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 NECTIN3Q9NQS3 549 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 NPDC1Q9NQX5 325 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 GPR173Q9NS66 373 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SLC22A11Q9NSA0 550 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 CUTCQ9NTM9 273 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 NLE1Q9NVX2 485 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 C2orf42Q9NWW7 574 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 MTCH1Q9NZJ7 389 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 CALML5Q9NZT1 146 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 COPS7AQ9UBW8 275 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 SUSD2Q9UGT4 822 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 PITPNC1Q9UKF7 332 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 PPM1HQ9ULR3 514 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ING4Q9UNL4 249 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 ARL5AQ9Y689 179 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 TPRP12270 2363 aaKnown RBP6.97□□□□□ -1.29
HDAC3-216ENST00000523088 GON4LQ3T8J9 2241 aa6.97□□□□□ -1.29
HDAC3-216ENST00000523088 NPIPA5A0A0B4J1W7 369 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PNMA8CA0A1B0GUJ8 204 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CIB4A0PJX0 185 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 FAM171A2A8MVW0 826 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 UPK3BL1B0FP48 263 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 C1orf196B1AJZ1 125 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 UPK3BL2E5RIL1 263 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 NPIPA5E9PKD4 350 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 NPIPA3F8WFD2 350 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 RNASEK-C17orf49H0YIS7 233 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 WWP2O00308 870 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 RNF13O43567 381 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 FZD7O75084 574 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 SNNO75324 88 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 LALBAP00709 142 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ALPLP05186 524 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ITGA5P08648 1049 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 MYL2P10916 166 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 FCGR1AP12314 374 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CYP4B1P13584 511 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PGAM1P18669 254 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 HTR1BP28222 390 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 PXNP49023 591 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 EVX1P49640 407 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 BLKP51451 505 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF143P52747 638 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 DCDP81605 110 aaKnown RBP6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CTBSQ01459 385 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 CLCQ05315 142 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 RBBP4Q09028 425 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 SLC10A7Q0GE19 358 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 EFEMP1Q12805 493 aa6.96□□□□□ -1.3
HDAC3-216ENST00000523088 ABRAXAS2Q15018 415 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms