RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 P2RX2Q9UBL9 471 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 USH1CQ9Y6N9 552 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 MTORP42345 2549 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 ZC3H12DA2A288 527 aaKnown RBP18.28■□□□□ 0.52
SDCBP-209ENST00000522243 RAD51DO75771 328 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 LY6G6DO95868 133 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 GGT1P19440 569 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 COX5AP20674 150 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 FKBP2P26885 142 aaKnown RBP18.28■□□□□ 0.52
SDCBP-209ENST00000522243 DSTNP60981 165 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 PPA1Q15181 289 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 FBXW9Q5XUX1 488 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 ADAM5Q6NVV9 412 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 ZNF433Q8N7K0 673 aaPredicted RBP18.28■□□□□ 0.52
SDCBP-209ENST00000522243 APH1AQ96BI3 265 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 DDIT4LQ96D03 193 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 COX4I2Q96KJ9 171 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 USB1Q9BQ65 265 aaKnown RBP18.28■□□□□ 0.52
SDCBP-209ENST00000522243 BDH2Q9BUT1 245 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 ROS1P08922 2347 aa18.28■□□□□ 0.52
SDCBP-209ENST00000522243 SETD2Q9BYW2 2564 aaPredicted RBP18.28■□□□□ 0.52
SDCBP-209ENST00000522243 FLNAP21333 2647 aaKnown RBP18.27■□□□□ 0.52
SDCBP-209ENST00000522243 KLF11O14901 512 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 CNOT4O95628 575 aaKnown RBP18.27■□□□□ 0.52
SDCBP-209ENST00000522243 TFPTP0C1Z6 253 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 ZCCHC18P0CG32 403 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 SLC1A3P43003 542 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 MAGEA8P43361 318 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 FOXG1P55316 489 aaPredicted RBP18.27■□□□□ 0.52
SDCBP-209ENST00000522243 ATP5J2P56134 94 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 MIER2Q8N344 545 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 CADM2Q8N3J6 435 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 SLC38A5Q8WUX1 472 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 FBXW5Q969U6 566 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 MUCL1Q96DR8 90 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 ZNF701Q9NV72 531 aaPredicted RBP18.27■□□□□ 0.52
SDCBP-209ENST00000522243 TRAPPC4Q9Y296 219 aa18.27■□□□□ 0.52
SDCBP-209ENST00000522243 A0A1W2PR80 420 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 CIB4A0PJX0 185 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 FAAHO00519 579 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 GPR171O14626 319 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 ZNF208O43345 1280 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 DNPH1O43598 174 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 MRPL33O75394 65 aaKnown RBP18.26■□□□□ 0.51
SDCBP-209ENST00000522243 SOD3P08294 240 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 UQCRBP14927 111 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 ACAA2P42765 397 aaKnown RBP18.26■□□□□ 0.51
SDCBP-209ENST00000522243 SLC16A1P53985 500 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 CRISP3P54108 245 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 RPS4XP62701 263 aaKnown RBP18.26■□□□□ 0.51
SDCBP-209ENST00000522243 SLC35A1P78382 337 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 H3F3AP84243 136 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 FAPQ12884 760 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 KRTAP21-3Q3LHN1 58 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 LIN52Q52LA3 116 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 TIMM23BQ5SRD1 257 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 AGBL2Q5U5Z8 902 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 SLC2A7Q6PXP3 512 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 EPGNQ6UW88 154 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 MSANTD1Q6ZTZ1 278 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 CLIP4Q8N3C7 705 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 OR52N5Q8NH56 324 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 PMM1Q92871 262 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 TMEM19Q96HH6 336 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 ADAM19Q9H013 955 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 NPAP1Q9NZP6 1156 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 CALML5Q9NZT1 146 aa18.26■□□□□ 0.51
SDCBP-209ENST00000522243 ZNF443Q9Y2A4 671 aaPredicted RBP18.26■□□□□ 0.51
SDCBP-209ENST00000522243 DSPPQ9NZW4 1301 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 FAM234BA2RU67 622 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 CDHR4A6H8M9 788 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 OR5H1A6NKK0 313 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 CCT8L1PA6NM43 557 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 PGM3O95394 542 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 HEXAP06865 529 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 NUDT7P0C024 238 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 DANCRP0C864 163 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 PRG2P13727 222 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 PAX1P15863 534 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 CXCR1P25024 350 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 BNIP2Q12982 314 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 ZNF672Q499Z4 452 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-209ENST00000522243 CASP12Q6UXS9 341 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 ZNF440Q8IYI8 595 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 OR52E4Q8NGH9 312 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 SMAP2Q8WU79 429 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-209ENST00000522243 GTF2H4Q92759 462 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 NAA11Q9BSU3 229 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-209ENST00000522243 PAIP1Q9H074 479 aaKnown RBP18.25■□□□□ 0.51
SDCBP-209ENST00000522243 SLCO1B3Q9NPD5 702 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 ASB6Q9NWX5 421 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 PCDHB14Q9Y5E9 798 aa18.25■□□□□ 0.51
SDCBP-209ENST00000522243 MAP1AP78559 2803 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-209ENST00000522243 A0A1W2PP18 115 aa18.24■□□□□ 0.51
SDCBP-209ENST00000522243 EIF1BO60739 113 aaKnown RBP18.24■□□□□ 0.51
SDCBP-209ENST00000522243 CDKN1AP38936 164 aa18.24■□□□□ 0.51
SDCBP-209ENST00000522243 CEACAM7Q14002 265 aa18.24■□□□□ 0.51
SDCBP-209ENST00000522243 C9orf135Q5VTT2 229 aa18.24■□□□□ 0.51
SDCBP-209ENST00000522243 EBF4Q9BQW3 602 aa18.24■□□□□ 0.51
SDCBP-209ENST00000522243 TRIM2Q9C040 744 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 608.5 ms