RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TMEM225BP0DP42 221 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 AQP2P41181 271 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 REEP5Q00765 189 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 EIF4EBP2Q13542 120 aaPredicted RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 GPR139Q6DWJ6 353 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SCGB1C1Q8TD33 95 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SLC7A6Q92536 515 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 MED20Q9H944 212 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 CBLCQ9ULV8 474 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 HHLA2Q9UM44 414 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 TRIM64A6NGJ6 449 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SYNGR4O95473 234 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 DCNP07585 359 aaKnown RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 P2RY14Q15391 338 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 FXNQ16595 210 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 TMEM244Q5VVB8 128 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 C3P1Q6ZMU1 363 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 KIAA1958Q8N8K9 716 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 ZSCAN4Q8NAM6 433 aaPredicted RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 OR56B4Q8NH76 319 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 UBQLN4Q9NRR5 601 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 H0YGG7 62 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SDC3O75056 442 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SLC43A1O75387 559 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 ARF3P61204 181 aaPredicted RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 CSNK2A1P68400 391 aaPredicted RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF616Q08AN1 781 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 KIAA0040Q15053 153 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 ZMYND11Q15326 602 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 DUSP7Q16829 419 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 EEF1A1P5Q5VTE0 462 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 WBP2NLQ6ICG8 309 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF852Q6ZMS4 543 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 CCDC190Q86UF4 302 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 OPALINQ96PE5 141 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SLC52A3Q9NQ40 469 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 H3BML4 177 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 ARSBP15848 533 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 PTPN6P29350 595 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 GJA4P35212 333 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 DUSP3P51452 185 aaPredicted RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 TNFRSF17Q02223 184 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 GPR50Q13585 617 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 EFR3AQ14156 821 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 C18orf63Q68DL7 685 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 CD300LGQ6UXG3 332 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 RSPO2Q6UXX9 243 aaPredicted RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 NINJ1Q92982 152 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 PTTG3PQ9NZH4 202 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 COQ3Q9NZJ6 369 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 TRAPPC4Q9Y296 219 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF281Q9Y2X9 895 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 SERTM1A2A2V5 107 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 BCDIN3DQ7Z5W3 292 aaKnown RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 HIDE1A8MVS5 230 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 SLC16A7O60669 478 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 HLA-DMAP28067 261 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 GK2Q14410 553 aaPredicted RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 FAM111BQ6SJ93 734 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 OR9A4Q8NGU2 314 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 GHSRQ92847 366 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 MEIS3P1A6NDR6 274 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 SRPX2O60687 465 aaPredicted RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 KCNK2O95069 426 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF14P17017 642 aaPredicted RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 SHC1P29353 583 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 EVI2BP34910 448 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 ZFP36L2P47974 494 aaKnown RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 DAP3P51398 398 aaKnown RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 CXADRP78310 365 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 NFATC4Q14934 902 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 POU4F3Q15319 338 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF709Q8N972 641 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 FAM71F1Q96KD3 344 aaPredicted RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 POLHQ9Y253 713 aa12.85□□□□□ -0.35
SYNPO-205ENST00000522122 UBE2J1Q9Y385 318 aaPredicted RBP12.85□□□□□ -0.35
SYNPO-205ENST00000522122 KCNE1BA0A087WTH5 132 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 JMJD7P0C870 316 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SNRPBP14678 240 aaKnown RBP12.84□□□□□ -0.35
SYNPO-205ENST00000522122 HENMT1Q5T8I9 393 aaKnown RBP12.84□□□□□ -0.35
SYNPO-205ENST00000522122 BEND4Q6ZU67 534 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 PM20D2Q8IYS1 436 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 GPR137CQ8N3F9 429 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SIRT5Q9NXA8 310 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SLC33A1O00400 549 aaPredicted RBP12.84□□□□□ -0.35
SYNPO-205ENST00000522122 IFNA5P01569 189 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 OR2T7P0C7T2 308 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 CPEP16870 476 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 HOXA9P31269 272 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 PRKAR1BP31321 381 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 MTNR1BP49286 362 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 RSU1Q15404 277 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF385BQ569K4 471 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 SAXO2Q658L1 398 aa12.84□□□□□ -0.35
SYNPO-205ENST00000522122 APOOLQ6UXV4 268 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms