RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 WDR77Q9BQA1 342 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF649Q9BS31 505 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 CRB3Q9BUF7 120 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 ADAM19Q9H013 955 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 HMG20AQ9NP66 347 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 AKIP1Q9NQ31 210 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 CORINQ9Y5Q5 1042 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 MCIDASD6RGH6 385 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 FADS1O60427 444 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 CALRP27797 417 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 TACR3P29371 465 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 EVI2BP34910 448 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 CD79BP40259 229 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 RPS4XP62701 263 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 TPBGQ13641 420 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 DPY19L2P2Q6ZN68 376 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 CPEB2Q7Z5Q1 589 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 IGFN1Q86VF2 1251 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR52N1Q8NH53 320 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 NUBPLQ8TB37 319 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 LRFN5Q96NI6 719 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 TEAD3Q99594 435 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 LPAR4Q99677 370 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 WDR12Q9GZL7 423 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR51V1Q9H2C8 321 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 MMP27Q9H306 513 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 PALMDQ9NP74 551 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 NPFFR2Q9Y5X5 522 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 A3GALT2U3KPV4 340 aa16.86■□□□□ 0.29
TRAPPC9-210ENST00000521667 CCDC182A6NF36 153 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 J3QRK9 145 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 GDF9O60383 454 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 SLC2A5P22732 501 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 ITPKBP27987 946 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 RPL4P36578 427 aaKnown RBP16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 MPLP40238 635 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 GRK6P43250 576 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 RPS7P62081 194 aaKnown RBP16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF74Q16587 644 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 MRPL14Q6P1L8 145 aaKnown RBP16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 TMEM205Q6UW68 189 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 CYB561A3Q8NBI2 242 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR5W2Q8NH69 310 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 LIPHQ8WWY8 451 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 ATOH1Q92858 354 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 UFD1Q92890 307 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 DEPDC7Q96QD5 511 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 KLHL21Q9UJP4 597 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 SSR3Q9UNL2 185 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 IER3IP1Q9Y5U9 82 aa16.85■□□□□ 0.29
TRAPPC9-210ENST00000521667 C17orf51A8MQB3 221 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 SCO2O43819 266 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 GMFGO60234 142 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 CYC1P08574 325 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 PGCP20142 388 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 IDUAP35475 653 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 SLC16A1P53985 500 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 PRPS1P60891 318 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 EGR4Q05215 589 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 EFR3AQ14156 821 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 ANKDD1AQ495B1 522 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 C16orf87Q6PH81 154 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 C16orf47Q6ZP98 133 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 ACBD7Q8N6N7 88 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 C10orf53Q8N6V4 93 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR52E2Q8NGJ4 325 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 NXF2Q9GZY0 626 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 RXFP3Q9NSD7 469 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 C19orf25Q9UFG5 118 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 TRBV11-1A0A0K0K1C0 115 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 C12orf71A8MTZ7 269 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 KHNYNO15037 678 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 LDOC1O95751 146 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 HIST1H1CP16403 213 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 CBFBQ13951 182 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 ZNF791Q3KP31 576 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 FAM98AQ8NCA5 519 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 OR4K13Q8NH42 304 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 TRMT61AQ96FX7 289 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 GPX7Q96SL4 187 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 CDADC1Q9BWV3 514 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 AKIRIN1Q9H9L7 192 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 MMP25Q9NPA2 562 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 NRIP3Q9NQ35 241 aa16.84■□□□□ 0.29
TRAPPC9-210ENST00000521667 ARPC3O15145 178 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 CDC40O60508 579 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 NUDT14O95848 222 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 GP1BAP07359 652 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 ZNF883P0CG24 379 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 CLUP10909 449 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 ZNF28P17035 718 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 P2RX1P51575 399 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 ACSM1Q08AH1 577 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 DBPQ10586 325 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 TOMM34Q15785 309 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 GXYLT1Q4G148 440 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 SDR9C7Q8NEX9 313 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 OR8K3Q8NH51 312 aa16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 THAP3Q8WTV1 239 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC9-210ENST00000521667 ASPNQ9BXN1 380 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms