RNA–Protein interactions for RNA: ENST00000516759.1

RNU7-28P-201, Transcript of RNA, U7 small nuclear 28 pseudogene, humanhuman

BASIC

Gene RNU7-28P, Length 62 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU7-28P-201ENST00000516759 MARCH1Q8TCQ1 289 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 BRSK1Q8TDC3 778 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 ACER1Q8TDN7 264 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 ST8SIA1Q92185 356 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 PIGCQ92535 297 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 SH3YL1Q96HL8 342 aaPredicted RBP0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 SMIM14Q96QK8 99 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 KCNA7Q96RP8 456 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 RASL11BQ9BPW5 248 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 SLC35A5Q9BS91 424 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 NIPSNAP3BQ9BS92 247 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 ALG12Q9BV10 488 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 CRNKL1Q9BZJ0 848 aaKnown RBP0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 ASB8Q9H765 288 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 NANOGQ9H9S0 305 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 POLE3Q9NRF9 147 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 AATFQ9NY61 560 aaKnown RBP eCLIP0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 RBAKQ9NYW8 714 aaPredicted RBP0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 TREM2Q9NZC2 230 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 CLCF1Q9UBD9 225 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 PHF11Q9UIL8 331 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 TIMM10BQ9Y5J6 103 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 WSB1Q9Y6I7 421 aa0.97□□□□□ -2.25
RNU7-28P-201ENST00000516759 ATRXP46100 2492 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 MAP3K15Q6ZN16 1313 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 IGHV3OR16-13A0A075B7E8 117 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 IGHV1OR21-1A0A087WYE8 117 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 TRBV6-6A0A0A6YYG2 114 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 NSG1A0A0A6YYJ2 146 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 A6NDX4 124 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 GJE1A6NN92 205 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 TRDCB7Z8K6 153 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 MAPK13O15264 365 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 SNAI2O43623 268 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 CXCL13O43927 109 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 PFKFB2O60825 505 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 PEX11AO75192 247 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 CA11O75493 328 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 SNAPINO95295 136 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 MMP1P03956 469 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 IGHV4-34P06331 123 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 H2BFMP0C1H6 154 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 TNNI3P19429 210 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 CCNCP24863 283 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 NMT1P30419 496 aaKnown RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 FGF9P31371 208 aaPredicted RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 SOX6P35712 828 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 AP3M2P53677 418 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 HSD17B7P56937 341 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 UBE2HP62256 183 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 SLC10A7Q0GE19 358 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 EBI3Q14213 229 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 NSDHLQ15738 373 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 MPPED2Q15777 294 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 DMRTC1Q5HYR2 192 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 RIPPLY2Q5TAB7 128 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 METTL11BQ5VVY1 283 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 CYB5R2Q6BCY4 276 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 GALNT17Q6IS24 598 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 ZSCAN25Q6NSZ9 544 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 TIFABQ6ZNK6 161 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 Q6ZR03 302 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 ZNF621Q6ZSS3 439 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 COX15Q7KZN9 410 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 THOC6Q86W42 341 aaKnown RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 VSTM4Q8IW00 320 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 NRMQ8IXM6 262 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 PIANPQ8IYJ0 282 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 ZNF786Q8N393 782 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 FAM71E2Q8N5Q1 922 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 GPATCH11Q8N954 259 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 ANKFN1Q8N957 763 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 FAM133AQ8N9E0 248 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 Q8N9W7 124 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 OR52H1Q8NGJ2 320 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 CCDC110Q8TBZ0 833 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 CTNNBL1Q8WYA6 563 aaPredicted RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 NDRG1Q92597 394 aaKnown RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 PAGE5Q96GU1 130 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 C16orf45Q96MC5 204 aaPredicted RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 TGM7Q96PF1 710 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 MTMR9Q96QG7 549 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 OR2M2Q96R28 347 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 GPA33Q99795 319 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 MRPL45Q9BRJ2 306 aaKnown RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 ERP44Q9BS26 406 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 CAPS2Q9BXY5 557 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 SLC25A39Q9BZJ4 359 aaPredicted RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 POLR2J2Q9GZM3 115 aaKnown RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 POLR2J3Q9H1A7 115 aaKnown RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 SUDS3Q9H7L9 328 aaPredicted RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 EML4Q9HC35 981 aaKnown RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 ZFP14Q9HCL3 533 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 CCL28Q9NRJ3 127 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 HPF1Q9NWY4 346 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 C6orf203Q9P0P8 240 aaPredicted RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 DCDC2Q9UHG0 476 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 ZNF225Q9UK10 706 aa0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 PTBP2Q9UKA9 531 aaKnown RBP0.96□□□□□ -2.26
RNU7-28P-201ENST00000516759 KLK12Q9UKR0 248 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms