RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 Q8NFD4 153 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 NFKBIDQ8NI38 313 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SETD7Q8WTS6 366 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 WDR89Q96FK6 387 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SPATA5L1Q9BVQ7 753 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 OR51B5Q9H339 312 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 IFT22Q9H7X7 185 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 DMRT3Q9NQL9 472 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SEMA5BQ9P283 1151 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 NLKQ9UBE8 527 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 PLEKHA6Q9Y2H5 1048 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ADAMTS9Q9P2N4 1935 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ARHGEF33A8MVX0 844 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 PATE3B3GLJ2 98 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 E5RI56 91 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SLC2A2P11168 524 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 HTR1FP30939 366 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 BSGP35613 385 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ID4P47928 161 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CARD18P57730 90 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SNRPD2P62316 118 aaKnown RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 QPRTQ15274 297 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 NDUFA9Q16795 377 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ATRAIDQ6UW56 229 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 FAM131AQ6UXB0 335 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 NRROSQ86YC3 692 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 DCUN1D3Q8IWE4 304 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SLC25A45Q8N413 288 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 STX19Q8N4C7 294 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SIRT6Q8N6T7 355 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ASB13Q8WXK3 278 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SLC9A6Q92581 669 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CNOT9Q92600 299 aaKnown RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SLC25A38Q96DW6 304 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 HIST1H2AHQ96KK5 128 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 APOLD1Q96LR9 279 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 YPEL4Q96NS1 127 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 TSSK3Q96PN8 268 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 GAL3ST1Q99999 423 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 PRSS27Q9BQR3 290 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 WACQ9BTA9 647 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SEBOXQ9HB31 216 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 TMEM100Q9NV29 134 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 STOX2Q9P2F5 926 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF175Q9Y473 711 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CACNG2Q9Y698 323 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 A0A1B0GTI1 187 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 RHPN2P1A8MT19 583 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 A8MX80 341 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 AIPO00170 330 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CATP04040 527 aaKnown RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 TCRBP04435 133 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 IFI6P09912 130 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 NPPBP16860 134 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 GSTM5P46439 218 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 HOXA1P49639 335 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 MED22Q15528 200 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 GCNT6Q5T4J0 391 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 OR2G6Q5TZ20 316 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CDCP2Q5VXM1 449 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF626Q68DY1 528 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 MOB3CQ70IA8 216 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 TPRA1Q86W33 373 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 RBM45Q8IUH3 476 aaKnown RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 P3H2Q8IVL5 708 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 LINC00471Q8N535 108 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ZSCAN1Q8NBB4 408 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 THAP3Q8WTV1 239 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 TSACCQ96A04 125 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 PNPLA2Q96AD5 504 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CIDECQ96AQ7 238 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 LIN37Q96GY3 246 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 LGR4Q9BXB1 951 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF436Q9C0F3 470 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 RXFP3Q9NSD7 469 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ING3Q9NXR8 418 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 COPZ2Q9P299 210 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 MBD2Q9UBB5 411 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 DKK4Q9UBT3 224 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 MOSPD1Q9UJG1 213 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CACNA1EQ15878 2313 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 TMEM272A0A1B0GTI8 110 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 MCRIP1C9JLW8 97 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SMAD7O15105 426 aaKnown RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ORC5O43913 435 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 UBXN7O94888 489 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 GADD45GO95257 159 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 IL5P05113 134 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 GUSBP08236 651 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 GIMD1P0DJR0 217 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ADCYAP1P18509 176 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 UQCRC2P22695 453 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 DPP4P27487 766 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ACADLP28330 430 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CHI3L1P36222 383 aaPredicted RBP6.81□□□□□ -1.32
CLIP1-205ENST00000514271 PODNL1Q6PEZ8 512 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 Q6ZTK2 550 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 PLXDC1Q8IUK5 500 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 GPR135Q8IZ08 494 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 OR56B2PQ8NGI1 322 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms