RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CAPZA1P52907 286 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 IL13RA1P78552 427 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 HNRNPA1L2Q32P51 320 aaKnown RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 LYPD8Q6UX82 237 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 CALHM3Q86XJ0 350 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 C2CD4CQ8TF44 421 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 RNF141Q8WVD5 230 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 PRTFDC1Q9NRG1 225 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 SDHAF3Q9NRP4 125 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ASB1Q9Y576 335 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 SMCHD1A6NHR9 2005 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 MEIS3P1A6NDR6 274 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 TVP23AA6NH52 213 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 H0YIV9 168 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 KHNYNO15037 678 aaKnown RBP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 EGFP01133 1207 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF250P15622 560 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 HCCSP53701 268 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 TAS2R19P59542 299 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 FABP5Q01469 135 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 TNK1Q13470 666 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 OTUD1Q5VV17 481 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 FCRLBQ6BAA4 426 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 OR4C11Q6IEV9 310 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 C12orf40Q86WS4 652 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 FAM46BQ96A09 425 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 TGM7Q96PF1 710 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 MARVELD1Q9BSK0 173 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 POMT2Q9UKY4 750 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF726A6NNF4 738 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 HHLA1C9JL84 531 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 LGI1O95970 557 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 THEGLP0DJG4 465 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 IFNGR1P15260 489 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 PSMB10P40306 273 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 RPL34P49207 117 aaKnown RBP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 HNRNPKP61978 463 aaKnown RBP eCLIP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 SLC7A9P82251 487 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 DNM1P34Q6PK57 102 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 HAVCR2Q8TDQ0 301 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 ELP5Q8TE02 316 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 KATNBL1Q9H079 304 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 APMAPQ9HDC9 416 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF629Q9UEG4 869 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 RPS10-NUDT3A0A1W2PQS6 291 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM82A0PJX8 343 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 CDHR4A6H8M9 788 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 LINC00862A6NCI5 91 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 RPS10P46783 165 aaKnown RBP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 RAB28P51157 221 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 PTCRAQ6ISU1 281 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 RPL22L1Q6P5R6 122 aaKnown RBP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 USP53Q70EK8 1073 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 NLGN4YQ8NFZ3 816 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-211ENST00000513346 NANPQ8TBE9 248 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM239Q8WW34 195 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 PRRT1Q99946 306 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 SEMA4GQ9NTN9 838 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 SCML1Q9UN30 329 aa10.49□□□□□ -0.73
TCOF1-211ENST00000513346 LATO43561 262 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 SRPX2O60687 465 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 HLA-AP01891 365 aaKnown RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 TUBG1P23258 451 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 GPR143P51810 404 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 TAS2R31P59538 309 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 SHHQ15465 462 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 GFOD2Q3B7J2 385 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM240Q5SV17 173 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF322Q6U7Q0 402 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 PRSS45Q7RTY3 260 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 DGLUCYQ7Z3D6 616 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 OR10Z1Q8NGY1 313 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 OR2L8Q8NGY9 312 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 OR2AJ1Q8NGZ0 328 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 SULT4A1Q9BR01 284 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 ACTRT3Q9BYD9 372 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 METTL7AQ9H8H3 244 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 RIF1Q5UIP0 2472 aaKnown RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 WASH3PC4AMC7 463 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 P2RX6O15547 441 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 DUX1O43812 170 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 NDUFB2O95178 105 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 PLGP00747 810 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 IFNA4P05014 189 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 HMGN2P05204 90 aaKnown RBP10.48□□□□□ -0.73
TCOF1-211ENST00000513346 ZDHHC11BP0C7U3 371 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 RAB6AP20340 208 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 KCNJ5P48544 419 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 GPR85P60893 370 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 CXADRP78310 365 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 DGCR2P98153 550 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 MEF2DQ14814 521 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM35AQ53FP2 167 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 HEPHL1Q6MZM0 1159 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 PTOV1Q86YD1 416 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 LKAAEAR1Q8TD35 194 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 GPR148Q8TDV2 347 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 CDCP1Q9H5V8 836 aa10.48□□□□□ -0.73
TCOF1-211ENST00000513346 NRIP3Q9NQ35 241 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms