RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CCR4P51679 360 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 NUDT6P53370 316 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 CASP9P55211 416 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 GPR68Q15743 365 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 SPANXN4Q5MJ08 99 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 C11orf71Q6IPW1 123 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 SLC22A25Q6T423 547 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 CMIPQ8IY22 773 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 KIRREL3Q8IZU9 778 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 UBE2J2Q8N2K1 259 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 ANKRD42Q8N9B4 389 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 FAM71CQ8NEG0 241 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 C1orf162Q8NEQ5 155 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-216ENST00000512683 OR4A15Q8NGL6 344 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 SLC35G5Q96KT7 338 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 ZNF300Q96RE9 604 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-216ENST00000512683 PAIP2Q9BPZ3 127 aaKnown RBP11.07□□□□□ -0.64
VEGFA-216ENST00000512683 INPP5KQ9BT40 448 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 OR51I1Q9H343 314 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 FKRPQ9H9S5 495 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-216ENST00000512683 DCTN4Q9UJW0 460 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 PMF1-BGLAPU3KQ54 211 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 MXRA5Q9NR99 2828 aa11.07□□□□□ -0.64
VEGFA-216ENST00000512683 A0A096LNT2 108 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 FAM234BA2RU67 622 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 ZNF716A6NP11 495 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 C9JVG2 144 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 E7EQL1 145 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 ZNF208O43345 1280 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 CYP7B1O75881 506 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 CPSF4O95639 269 aaKnown RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 UBTFL6P0CB48 400 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 TFPIP10646 304 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 UQCRC2P22695 453 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 IL12AP29459 219 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 FABP6P51161 128 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 EFNA4P52798 201 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 UFM1P61960 85 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 H3F3AP84243 136 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 FUT5Q11128 374 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 MAPK14Q16539 360 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 TMEM249Q2WGJ8 235 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 FAM174BQ3ZCQ3 159 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 C6orf52Q5T4I8 152 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 HHATQ5VTY9 493 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 SAXO2Q658L1 398 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 CYB5R2Q6BCY4 276 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 C16orf62Q7Z3J2 963 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 ATG4DQ86TL0 474 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 PIAS4Q8N2W9 510 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 ZNF563Q8TA94 476 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 RAB8BQ92930 207 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 ZNF775Q96BV0 537 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 NAA11Q9BSU3 229 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 CACNG6Q9BXT2 260 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 AMBRA1Q9C0C7 1298 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 QRSL1Q9H0R6 528 aaKnown RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 AIG1Q9NVV5 245 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 NPAP1Q9NZP6 1156 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 TMEM181Q9P2C4 612 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 GDF2Q9UK05 429 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 FBXO9Q9UK97 447 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-216ENST00000512683 POU2F3Q9UKI9 436 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 MKLN1Q9UL63 735 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 AMDHD2Q9Y303 409 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 WDR45Q9Y484 360 aa11.06□□□□□ -0.64
VEGFA-216ENST00000512683 IGHV4-30-2A0A087WSY4 118 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 PRAMEF27A3QJZ7 478 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 E9PBE3 544 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 PDLIM1O00151 329 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 FAAHO00519 579 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 KIAA0513O60268 411 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 NDUFS7O75251 213 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 OR12D1P0DN82 309 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 APOBEC3AP31941 199 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-216ENST00000512683 ANXA11P50995 505 aaKnown RBP11.05□□□□□ -0.64
VEGFA-216ENST00000512683 SLC18A1P54219 525 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 SLC35A1P78382 337 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 IRX1P78414 480 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-216ENST00000512683 KCNJ10P78508 379 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 GNA13Q14344 377 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 GABRA6Q16445 453 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 DPY19L1Q2PZI1 675 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 ADGRG3Q86Y34 549 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 XAGE5Q8WWM1 108 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 TLCD1Q96CP7 247 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 ZG16BQ96DA0 208 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 NEURL3Q96EH8 262 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 CCDC115Q96NT0 180 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 KCNK17Q96T54 332 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 BEX2Q9BXY8 128 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 WDR55Q9H6Y2 383 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-216ENST00000512683 MOV10Q9HCE1 1003 aaKnown RBP11.05□□□□□ -0.64
VEGFA-216ENST00000512683 OBP2BQ9NPH6 170 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 THAP1Q9NVV9 213 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 SLC9A8Q9Y2E8 581 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 GPR45Q9Y5Y3 372 aa11.05□□□□□ -0.64
VEGFA-216ENST00000512683 RTTNQ86VV8 2226 aa11.04□□□□□ -0.64
VEGFA-216ENST00000512683 NDUFS8O00217 210 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms