RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MAELQ96JY0 434 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 FCRL3Q96P31 734 aaPredicted RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 CBLCQ9ULV8 474 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 REREQ9P2R6 1566 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 A0A0B4J293 547 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 TMEM221A6NGB7 291 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 MS4A18H0YCH9 400 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 M0R296 226 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 SNRNP70P08621 437 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 OR5G3P0C626 314 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 TNFRSF1AP19438 455 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 RPS5P46782 204 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 FOLH1Q04609 750 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 POU4F3Q15319 338 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 MS4A18Q3C1V0 323 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 KRBOX4Q5JUW0 171 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 OR2A2Q6IF42 318 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 NPSR1Q6W5P4 371 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 DNAJC22Q8N4W6 341 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 ZNF317Q96PQ6 595 aaPredicted RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 MYOZ1Q9NP98 299 aaPredicted RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 KCNMB3Q9NPA1 279 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 TRAV17A0A0B4J275 112 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 FZD7O75084 574 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 IGHV3-9P01782 118 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 CERS1P27544 350 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 KIR2DL1P43626 348 aaPredicted RBP8.34□□□□□ -1.07
VCAN-208ENST00000512590 KIR2DL2P43627 348 aaPredicted RBP8.34□□□□□ -1.07
VCAN-208ENST00000512590 VEGFCP49767 419 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 YPEL5P62699 121 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SHHQ15465 462 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 RAB41Q5JT25 222 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 PAGE3Q5JUK9 113 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 ADGRG3Q86Y34 549 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SLC35F2Q8IXU6 374 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 CLEC4CQ8WTT0 213 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 HSH2DQ96JZ2 352 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 DPH1Q9BZG8 443 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 PELI2Q9HAT8 420 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MOV10Q9HCE1 1003 aaKnown RBP8.34□□□□□ -1.07
VCAN-208ENST00000512590 SLC22A2O15244 555 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 PRAMEF11O60813 436 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 PPP1R3DO95685 299 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SDC1P18827 310 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 ACRV1P26436 265 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 ID1P41134 155 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 GPR4P46093 362 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MAP2K3P46734 347 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SOWAHAQ2M3V2 549 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 FJX1Q86VR8 437 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 C15orf54Q8N8G6 183 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 OR13C9Q8NGT0 318 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SLCO2A1Q92959 643 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 FKBP10Q96AY3 582 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 TMIGD2Q96BF3 282 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MRAP2Q96G30 205 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 OR52B2Q96RD2 323 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MTHFD2LQ9H903 347 aaPredicted RBP8.34□□□□□ -1.07
VCAN-208ENST00000512590 CXorf21Q9HAI6 301 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 FGF21Q9NSA1 209 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MUTYHQ9UIF7 546 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 RIMS1Q86UR5 1692 aaKnown RBP8.34□□□□□ -1.07
VCAN-208ENST00000512590 NID2Q14112 1375 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 ZNF99A8MXY4 864 aaPredicted RBP8.34□□□□□ -1.07
VCAN-208ENST00000512590 NFKBIEO00221 500 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 RABL3Q5HYI8 236 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MARCH8Q5T0T0 291 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MEDAGQ5VYS4 303 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 LHFPL3Q86UP9 236 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MISPQ8IVT2 679 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 CDH26Q8IXH8 852 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SLC37A3Q8NCC5 494 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 OR52N2Q8NGI0 321 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 RND1Q92730 232 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MS4A4EQ96PG1 132 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SLCO3A1Q9UIG8 710 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 ADAMTS13Q76LX8 1427 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 TUBAL3A6NHL2 446 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 IRS1P35568 1242 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MTCP1P56278 107 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 GPR85P60893 370 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 CYP1B1Q16678 543 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 MPEG1Q2M385 716 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SLC10A6Q3KNW5 377 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 CYBRD1Q53TN4 286 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 SLC27A4Q6P1M0 643 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 LIPIQ6XZB0 460 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 PGAP1Q75T13 922 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 TMEM150AQ86TG1 271 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 NIPA2Q8N8Q9 360 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 FNDC9Q8TBE3 224 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 RPEQ96AT9 228 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 TCEAL4Q96EI5 215 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 RHNO1Q9BSD3 238 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 C1QTNF3Q9BXJ4 246 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 PATZ1Q9HBE1 687 aaKnown RBP8.34□□□□□ -1.07
VCAN-208ENST00000512590 AMBNQ9NP70 447 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 CMAHPQ9Y471 501 aa8.34□□□□□ -1.07
VCAN-208ENST00000512590 PRSS51A0A1B0GVH4 220 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 DCDC2BA2VCK2 349 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms