RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 FPR1P21462 350 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 ADSLP30566 484 aaPredicted RBP11.78□□□□□ -0.52
RNF4-215ENST00000511843 NTF4P34130 210 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 HTR3AP46098 478 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 OR3A2P47893 321 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 MTPNP58546 118 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 KEAP1Q14145 624 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 GLIPR1L2Q4G1C9 344 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 SPNS3Q6ZMD2 512 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 DHDDSQ86SQ9 333 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 ZNF440Q8IYI8 595 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 NINJ1Q92982 152 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 DDIT4LQ96D03 193 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 ZHX1-C8orf76Q96EF9 292 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 ADAM19Q9H013 955 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 UBTD1Q9HAC8 227 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 CACYBPQ9HB71 228 aaKnown RBP11.78□□□□□ -0.52
RNF4-215ENST00000511843 GP6Q9HCN6 339 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 BCL2L10Q9HD36 194 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 THUMPD1Q9NXG2 353 aaKnown RBP11.78□□□□□ -0.52
RNF4-215ENST00000511843 TMEM181Q9P2C4 612 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 ZNF232Q9UNY5 417 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 TRIM33Q9UPN9 1127 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 HDGFL3Q9Y3E1 203 aa11.78□□□□□ -0.52
RNF4-215ENST00000511843 ITPR3Q14573 2671 aa11.77□□□□□ -0.52
RNF4-215ENST00000511843 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.77□□□□□ -0.53
RNF4-215ENST00000511843 LYZL6O75951 148 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 GOSR1O95249 250 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 PLAUP00749 431 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 UQCRBP14927 111 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 GPX2P18283 190 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 PSMB1P20618 241 aaKnown RBP11.77□□□□□ -0.53
RNF4-215ENST00000511843 CXCR1P25024 350 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 CDK6Q00534 326 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 GUCY1A3Q02108 690 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 SCARB2Q14108 478 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 CAPRIN1Q14444 709 aaKnown RBP11.77□□□□□ -0.53
RNF4-215ENST00000511843 ADRM1Q16186 407 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 RUNDC3AQ59EK9 446 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 SFRP5Q5T4F7 317 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 REEP3Q6NUK4 255 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 GALNT5Q7Z7M9 940 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 ATG4DQ86TL0 474 aaPredicted RBP11.77□□□□□ -0.53
RNF4-215ENST00000511843 ZNF100Q8IYN0 542 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 STON2Q8WXE9 905 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 RABEP2Q9H5N1 569 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 LEF1Q9UJU2 399 aaPredicted RBP11.77□□□□□ -0.53
RNF4-215ENST00000511843 GPR52Q9Y2T5 361 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 IFT52Q9Y366 437 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 NDUFAF1Q9Y375 327 aa11.77□□□□□ -0.53
RNF4-215ENST00000511843 ZNF724A8MTY0 619 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 ANGPT2O15123 496 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 ZNF208O43345 1280 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 AKR7A3O95154 331 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 VIMP08670 466 aaKnown RBP11.76□□□□□ -0.53
RNF4-215ENST00000511843 CD53P19397 219 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 PPIBP23284 216 aaKnown RBP11.76□□□□□ -0.53
RNF4-215ENST00000511843 IL32P24001 234 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 CLK1P49759 484 aaKnown RBP11.76□□□□□ -0.53
RNF4-215ENST00000511843 COPZ1P61923 177 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 OR7A5Q15622 319 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 PRAMEF8Q5VWM4 474 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 PRAMEF7Q5VXH5 474 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 WBP2NLQ6ICG8 309 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 PTOV1Q86YD1 416 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 TMEM99Q8N816 258 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 STEAP2Q8NFT2 490 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 PIGXQ8TBF5 258 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 C3orf49Q96BT1 292 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 PLPPR2Q96GM1 343 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 FOXC2Q99958 501 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 WFDC6Q9BQY6 131 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 TACO1Q9BSH4 297 aaKnown RBP11.76□□□□□ -0.53
RNF4-215ENST00000511843 TMEM45AQ9NWC5 275 aa11.76□□□□□ -0.53
RNF4-215ENST00000511843 NOSIPQ9Y314 301 aaKnown RBP11.76□□□□□ -0.53
RNF4-215ENST00000511843 ROS1P08922 2347 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 IGKV3D-15A0A087WSY6 115 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 LIPT2A6NK58 231 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 EVPLLA8MZ36 301 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 FBP2O00757 339 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 OPN1SWP03999 348 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 ETS2P15036 469 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 PPP3CBP16298 524 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 PTNP21246 168 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 IGHV1-2P23083 117 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 HTR2AP28223 471 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 IDUAP35475 653 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 FOXG1P55316 489 aaPredicted RBP11.75□□□□□ -0.53
RNF4-215ENST00000511843 SLC35A1P78382 337 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 IRX1P78414 480 aaPredicted RBP11.75□□□□□ -0.53
RNF4-215ENST00000511843 H3F3AP84243 136 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 ITGADQ13349 1161 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 NFYCQ13952 458 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 TAB1Q15750 504 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 CYP51A1Q16850 503 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 DEFB113Q30KQ7 82 aa11.75□□□□□ -0.53
RNF4-215ENST00000511843 OTUD3Q5T2D3 398 aaPredicted RBP11.75□□□□□ -0.53
RNF4-215ENST00000511843 Q6ZT83 130 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms