RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ACKR1Q16570 336 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 C2CD6Q53TS8 623 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 SPANXN4Q5MJ08 99 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 FAM120AOSQ5T036 256 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 SIGLEC15Q6ZMC9 328 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 KCTD9Q7L273 389 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 SCD5Q86SK9 330 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 BLIDQ8IZY5 108 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 DAW1Q8N136 415 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 ARIH2OSQ8N7S6 290 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 ERMNQ8TAM6 284 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 FAM57AQ8TBR7 257 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 PCDHB18PQ96TA0 734 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 RBM4BQ9BQ04 359 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 CHMP4BQ9H444 224 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 FNDC4Q9H6D8 234 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 SUDS3Q9H7L9 328 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 MID1IP1Q9NPA3 183 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 B4GALT7Q9UBV7 327 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 EIF3LQ9Y262 564 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 HS3ST2Q9Y278 367 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 PCM1Q15154 2024 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 A0A0A6YYC8 382 aaPredicted RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 LCE6AA0A183 80 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 GOLGA6L7A0A1B0GV03 622 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 C2orf92A0A1B0GVN3 265 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC9B1P1A6NJY1 282 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 EPM2AB3EWF7 344 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 E9PQ18 207 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 C3orf84H3BNL1 204 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 I3L1I5 382 aaPredicted RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 K7EQD1 137 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 KIAA0513O60268 411 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ALOX12BO75342 701 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 B3GALNT1O75752 331 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 PALMO75781 387 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 KLF7O75840 302 aaPredicted RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 NXPH4O95158 308 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 P4HA1P13674 534 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 FOLR1P15328 257 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF10P21506 573 aaPredicted RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 GIFP27352 417 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 RPA1P27694 616 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 RORAP35398 523 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ACTR1BP42025 376 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC1A3P43003 542 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 PLK1P53350 603 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ADARP55265 1226 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ACTR1AP61163 376 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 YWHAGP61981 247 aaKnown RBP eCLIP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 TNNC1P63316 161 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 VLDLRP98155 873 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 CEACAM7Q14002 265 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 MAPK11Q15759 364 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 WSCD2Q2TBF2 565 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 TMEM249Q2WGJ8 235 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 DNAJC21Q5F1R6 531 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 DOK6Q6PKX4 331 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 TMEM270Q6UE05 265 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 LCLAT1Q6UWP7 414 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 GDPGP1Q6ZNW5 385 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 C17orf107Q6ZR85 190 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 Q6ZVQ6 151 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 PAQR9Q6ZVX9 377 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 RFPL4BQ6ZWI9 263 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 SH2D6Q7Z4S9 175 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ASPGQ86U10 573 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 GTSCR1Q86UQ5 136 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 LCA5Q86VQ0 697 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 LAX1Q8IWV1 398 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 DND1Q8IYX4 353 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 METTL4Q8N3J2 472 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 SFRP1Q8N474 314 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 NAT8LQ8N9F0 302 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 DCAF4L2Q8NA75 395 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 SMYD1Q8NB12 490 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 Q8NBF4 154 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 AQP11Q8NBQ7 271 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 OR10G7Q8NGN6 311 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 OR2Y1Q8NGV0 311 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 MRAPQ8TCY5 172 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC2A14Q8TDB8 520 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 RNF139Q8WU17 664 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 RNASE6Q93091 150 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC35C1Q96A29 364 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 RFT1Q96AA3 541 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 AP2M1Q96CW1 435 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 BPIFA2Q96DR5 249 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ANKRD36BP1Q96IX9 119 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 CELF6Q96J87 481 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 VGLL1Q99990 258 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 CCM2Q9BSQ5 444 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 CABLES2Q9BTV7 478 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 WRAP53Q9BUR4 548 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 TIPINQ9BVW5 301 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC7A5P2Q9GIP4 190 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 ATG10Q9H0Y0 220 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 TSPY26PQ9H489 355 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 RNPEPL1Q9HAU8 725 aa2.88□□□□□ -1.95
TOPBP1-208ENST00000511439 FANCEQ9HB96 536 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms