RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SCARB2Q14108 478 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 COMTD1Q86VU5 262 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 GABRG1Q8N1C3 465 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 DNAJA3Q96EY1 480 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 KAT8Q9H7Z6 458 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 KLHL28Q9NXS3 571 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 KLHL14Q9P2G3 628 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 KLHL9Q9P2J3 617 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 TESMINQ9Y4I5 508 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 OTOGQ6ZRI0 2925 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 ROS1P08922 2347 aa14.33□□□□□ -0.11
PDLIM5-212ENST00000509333 IGKV3D-15A0A087WSY6 115 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 LOC100653049A0A140TA62 436 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 ENO4A6NNW6 628 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 ZNF716A6NP11 495 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 M0QX08 132 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 FRS3O43559 492 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 DNPH1O43598 174 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 KRT34O76011 436 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 MFN2O95140 757 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 HRGP04196 525 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 FESP07332 822 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 FPR1P21462 350 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 ADSLP30566 484 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 DNAJA1P31689 397 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 CCKARP32238 428 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 OR2B6P58173 313 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 HOXC5Q00444 222 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 NFYCQ13952 458 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 GLIPR1L2Q4G1C9 344 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 NANOGP8Q6NSW7 305 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 DHRS4L2Q6PKH6 230 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 TFAP2EQ6VUC0 442 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 CDH24Q86UP0 819 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 STK32CQ86UX6 486 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 CCDC103Q8IW40 242 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 CADM2Q8N3J6 435 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 DDIT4LQ96D03 193 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 ZNF300Q96RE9 604 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 TACO1Q9BSH4 297 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 HDHD5Q9BXW7 423 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 PLEKHF2Q9H8W4 249 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 NANOGQ9H9S0 305 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 CACYBPQ9HB71 228 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 MRGBPQ9NV56 204 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 GPR52Q9Y2T5 361 aa14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 ANKRD17O75179 2603 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-212ENST00000509333 A0A1W2PPR1 153 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 SIAH2O43255 324 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 RAMP1O60894 148 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 NPIPB7O75200 414 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 SERPINB7O75635 380 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 GOSR1O95249 250 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 THBDP07204 575 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 CRYGSP22914 178 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 EDNRAP25101 427 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 OR3A2P47893 321 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 PCBP3P57721 371 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 MTPNP58546 118 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 SLC35A1P78382 337 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 DMTNQ08495 405 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 RBBP4Q09028 425 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 BNIP2Q12982 314 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 CYLC2Q14093 348 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 CAPRIN1Q14444 709 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 NET1Q7Z628 596 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 KRT73Q86Y46 540 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 LSMEM1Q8N8F7 131 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 C11orf65Q8NCR3 313 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 HIPK4Q8NE63 616 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 C3orf49Q96BT1 292 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 LRRC58Q96CX6 371 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 WFDC6Q9BQY6 131 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 SPATA5L1Q9BVQ7 753 aa14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 HRNRQ86YZ3 2850 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 PRRC2AP48634 2157 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-212ENST00000509333 A8MVM7 634 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 DEFB108AA8MXU0 73 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 KLF4O43474 513 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 TPST2O60704 377 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 EIF1BO60739 113 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 NPPAP01160 153 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 PSMB1P20618 241 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 SLC16A1P53985 500 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 CEACAM7Q14002 265 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 TESK1Q15569 626 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 DUSP7Q16829 419 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 COQ5Q5HYK3 327 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 SFRP5Q5T4F7 317 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 GALNT5Q7Z7M9 940 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 ATG4DQ86TL0 474 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 OR10A6Q8NH74 314 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 C10orf82Q8WW14 230 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 ZNF607Q96SK3 696 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 MED18Q9BUE0 208 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 OR10A4Q9H209 315 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 FANCFQ9NPI8 374 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 ZNF226Q9NYT6 803 aa14.31□□□□□ -0.12
PDLIM5-212ENST00000509333 C6orf203Q9P0P8 240 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms