RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GPIP06744 558 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 GGT1P19440 569 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 ENPP1P22413 925 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 GTF2E2P29084 291 aaKnown RBP8.2□□□□□ -1.1
NUP54-207ENST00000508583 DIO1P49895 249 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 ZNF136P52737 540 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 CTBP2P56545 445 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 SELENOWP63302 87 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 SLC35A1P78382 337 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 SLC25A3Q00325 362 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 MYBPHQ13203 477 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 MFSD13AQ14CX5 517 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 ZNF239Q16600 458 aaKnown RBP8.2□□□□□ -1.1
NUP54-207ENST00000508583 FKBP9P1Q75LS8 142 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 MAMDC2Q7Z304 686 aaPredicted RBP8.2□□□□□ -1.1
NUP54-207ENST00000508583 CYP4Z1Q86W10 505 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 CARM1Q86X55 608 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 MARVELD2Q8N4S9 558 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 FNDC9Q8TBE3 224 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 PIGXQ8TBF5 258 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 SLC38A4Q969I6 547 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 C3orf49Q96BT1 292 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 TPD52L3Q96J77 140 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 MPP4Q96JB8 637 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 CDRT15Q96T59 188 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 MCHR1Q99705 422 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 NAA11Q9BSU3 229 aaPredicted RBP8.2□□□□□ -1.1
NUP54-207ENST00000508583 GORASP2Q9H8Y8 452 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 RNF122Q9H9V4 155 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 EMC3Q9P0I2 261 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 Q9UFV3 132 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 RNF6Q9Y252 685 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 SH3GLB1Q9Y371 365 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 CHST2Q9Y4C5 530 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 SNX13Q9Y5W8 968 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 DOPEY2Q9Y3R5 2298 aa8.2□□□□□ -1.1
NUP54-207ENST00000508583 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 A0A0B4J2E0 115 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 A0A1B0GWA3 101 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 A0A1B0GX12 115 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 TRAPPC13A5PLN9 417 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 H0YC42 278 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 M0R3H8 397 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 FRS3O43559 492 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 CHP2O43745 196 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 GCM2O75603 506 aaPredicted RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 PRKD3O94806 890 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 AHSA1O95433 338 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 ZNF682O95780 498 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 SERPINA1P01009 418 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 OPN1LWP04000 364 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 THRBP10828 461 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 PRG2P13727 222 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 ITGA2P17301 1181 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 HOXB6P17509 224 aaKnown RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 CCNA2P20248 432 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 IL11P20809 199 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 BMP5P22003 454 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 HTR2AP28223 471 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 IDUAP35475 653 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 TPD52P55327 224 aaPredicted RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 TAS2R41P59536 307 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 OR1Q1Q15612 314 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 GLIPR1L2Q4G1C9 344 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 IFI44LQ53G44 452 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 MTX3Q5HYI7 312 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 TMEM201Q5SNT2 666 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 GLYATQ6IB77 296 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 SEM1Q6ZVN7 128 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 CBLL1Q75N03 491 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 FCRLAQ7L513 359 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 FAM214BQ7L5A3 538 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 ATG4DQ86TL0 474 aaPredicted RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 STK32CQ86UX6 486 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 RPRMLQ8N4K4 120 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 C9orf106Q8NAJ2 232 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 RBM15BQ8NDT2 890 aaKnown RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 GPR32P1Q8NGA4 272 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 OR6T1Q8NGN1 323 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 VANGL1Q8TAA9 524 aaPredicted RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 ADAMTS16Q8TE57 1224 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 RNF128Q8TEB7 428 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 MCUR1Q96AQ8 359 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 INTS12Q96CB8 462 aaKnown RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 ZNF845Q96IR2 970 aaPredicted RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 NSMCE2Q96MF7 247 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 NPAS1Q99742 590 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 KLHDC3Q9BQ90 382 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 TMEM43Q9BTV4 400 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 SLC19A3Q9BZV2 496 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 TRIM15Q9C019 465 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 COQ10BQ9H8M1 238 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 PACSIN3Q9UKS6 424 aa8.19□□□□□ -1.1
NUP54-207ENST00000508583 SPTAN1Q13813 2472 aaKnown RBP8.19□□□□□ -1.1
NUP54-207ENST00000508583 INTS1Q8N201 2190 aaKnown RBP8.18□□□□□ -1.1
NUP54-207ENST00000508583 CACNA1CQ13936 2221 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 COL12A1Q99715 3063 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 TRAV36DV7A0A075B6V5 113 aa8.18□□□□□ -1.1
NUP54-207ENST00000508583 A0A087WUJ7 227 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms