RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ATXN7L3Q14CW9 347 aaPredicted RBP3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SF3B4Q15427 424 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 QRICH1Q2TAL8 776 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SNAI3Q3KNW1 292 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SOHLH1Q5JUK2 328 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SAMD4BQ5PRF9 694 aaKnown RBP3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 PDSS1Q5T2R2 415 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SEL1L2Q5TEA6 688 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 C9orf135Q5VTT2 229 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 TMPRSS11AQ6ZMR5 421 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 CYS1Q717R9 158 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SHFQ7M4L6 423 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SETD3Q86TU7 594 aaPredicted RBP3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SPAG16Q8N0X2 631 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 TBC1D19Q8N5T2 526 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 OR56A4Q8NGH8 313 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 OR1B1Q8NGR6 318 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 OR4Q3Q8NH05 313 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 OR2L2Q8NH16 312 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 PLPPR1Q8TBJ4 325 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 GPR148Q8TDV2 347 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 DNAJB3Q8WWF6 145 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 TM9SF4Q92544 642 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 TFGQ92734 400 aaPredicted RBP3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 CPNE4Q96A23 557 aaPredicted RBP3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 ISOC2Q96AB3 205 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 NUS1Q96E22 293 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 ZNF333Q96JL9 665 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 LYZL4Q96KX0 146 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SLC6A7Q99884 636 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 POLDIP3Q9BY77 421 aaKnown RBP3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 SLC25A51Q9H1U9 297 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 ALG9Q9H6U8 611 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 POPDC2Q9HBU9 364 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 MOV10Q9HCE1 1003 aaKnown RBP3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 POLD4Q9HCU8 107 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 GDF3Q9NR23 364 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 NANSQ9NR45 359 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 THSD1Q9NS62 852 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 TAS2R9Q9NYW1 312 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 RAB23Q9ULC3 237 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 AUP1Q9Y679 476 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 NCOA3Q9Y6Q9 1424 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 ROCK1Q13464 1354 aa3.76□□□□□ -1.81
SMARCA5-202ENST00000508573 TRBV9A0A0B4J1U6 114 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 TMEM114B3SHH9 223 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 TMEM178BH3BS89 294 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 CASKO14936 926 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 P2RX6O15547 441 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 SYNGR3O43761 229 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 TOXO94900 526 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 AP2A2O94973 939 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 RCBTB2O95199 551 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 LRATO95237 230 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 F10P00742 488 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 PLAUP00749 431 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 IFNA14P01570 189 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 FGGP02679 453 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 SP1P08047 785 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 CBLP22681 906 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 CALCRP30988 508 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 COILP38432 576 aaPredicted RBP3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 NBL1P41271 181 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 CSNK1A1P48729 337 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 CDH12P55289 794 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 S100A12P80511 92 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 KLC1Q07866 573 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 MGAT3Q09327 533 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 CDC20Q12834 499 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 ITGA9Q13797 1035 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 SLC15A2Q16348 729 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 ISXQ2M1V0 245 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 SLC25A52Q3SY17 297 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 PAN3Q58A45 887 aaKnown RBP3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 DMRTC1Q5HYR2 192 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 PRMT9Q6P2P2 845 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 FAM122CQ6P4D5 195 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 LEG1Q6P5S2 330 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 LINC00336Q6ZUF6 198 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 PIM3Q86V86 326 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 TMEM25Q86YD3 366 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 APRG1Q8IVJ8 170 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 GBGT1Q8N5D6 347 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 DMBX1Q8NFW5 382 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 OR8K1Q8NGG5 319 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 OR4C15Q8NGM1 316 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 OR13C5Q8NGS8 318 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 OSR1Q8TAX0 266 aaPredicted RBP3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 ACTL9Q8TC94 416 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 SPPL2AQ8TCT8 520 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 DTD1Q8TEA8 209 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 NXPE2Q96DL1 559 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 PACRGQ96M98 296 aaPredicted RBP3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 ZNF75AQ96N20 296 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 MBOAT7Q96N66 472 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 CNN2Q99439 309 aaKnown RBP3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 CIB1Q99828 191 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 NICN1Q9BSH3 213 aa3.75□□□□□ -1.81
SMARCA5-202ENST00000508573 BEX2Q9BXY8 128 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms