RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 NPTX1Q15818 432 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 NRF1Q16656 503 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 FAM91A1Q658Y4 838 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 ERICH5Q6P6B1 374 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 FAM214BQ7L5A3 538 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 DMRTC2Q8IXT2 367 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 MICU2Q8IYU8 434 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 OR2T12Q8NG77 320 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 OR4D11Q8NGI4 311 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 RNASE6Q93091 150 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 MARVELD3Q96A59 401 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 LRRC37BQ96QE4 947 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 HOPXQ9BPY8 73 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 OPN3Q9H1Y3 402 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 PIGMQ9H3S5 423 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 ARL8BQ9NVJ2 186 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 ING1Q9UK53 422 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 HDGFL3Q9Y3E1 203 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 TEX15Q9BXT5 2789 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 MPDZO75970 2070 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 A0A1B0GWA3 101 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 HNRNPRO43390 633 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 DCTN3O75935 186 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 PMS2P2O95744 297 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 CXCR1P25024 350 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 FKBP2P26885 142 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 AGTR1P30556 359 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 UQCRC1P31930 480 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 CSNK2A1P68400 391 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 LIPEQ05469 1076 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 EEF1A1P5Q5VTE0 462 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 LSMEM1Q8N8F7 131 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 OR52E4Q8NGH9 312 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 DDIT4LQ96D03 193 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 KLHL28Q9NXS3 571 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 GALNT8Q9NY28 637 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 ABCD2Q9UBJ2 740 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 TESQ9UGI8 421 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 SLC13A4Q9UKG4 626 aa16.27■□□□□ 0.2
PDLIM7-216ENST00000506537 ELOVL7A1L3X0 281 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 A8MXE2 369 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 ZNF814B7Z6K7 855 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 MSTNO14793 375 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 SMNDC1O75940 238 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 PLGP00747 810 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 C8BP07358 591 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 PRF1P14222 555 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 MAP2K6P52564 334 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 PSME3P61289 254 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 RNPS1Q15287 305 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 ABLIM2Q6H8Q1 611 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 ZNF474Q6S9Z5 364 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 C6orf89Q6UWU4 347 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 RBM45Q8IUH3 476 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 ZNF295-AS1Q8N0V1 137 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 OR6T1Q8NGN1 323 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 OR6K3Q8NGY3 331 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 PSD2Q9BQI7 771 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 RBM24Q9BX46 236 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 TRIM2Q9C040 744 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 GLRX2Q9NS18 164 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 TMEM181Q9P2C4 612 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 KLHL13Q9P2N7 655 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 AP3M1Q9Y2T2 418 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 EMC9Q9Y3B6 208 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 ANKHD1Q8IWZ3 2542 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 APCP25054 2843 aa16.26■□□□□ 0.19
PDLIM7-216ENST00000506537 A0A0B4J2E0 115 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 A0A1B0GX12 115 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 CYTIPO60759 359 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 RAMP1O60894 148 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 NPIPB7O75200 414 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 CD8BP10966 210 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 GSK3BP49841 420 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 CTBP2P56545 445 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 OR2B6P58173 313 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 NCALDP61601 193 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 EGR4Q05215 589 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 OR1Q1Q15612 314 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 GKAP1Q5VSY0 366 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 TSPYL5Q86VY4 417 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 MCEMP1Q8IX19 187 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 TUSC5Q8IXB3 177 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 SLC43A2Q8N370 569 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 FITM2Q8N6M3 262 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 SLC26A7Q8TE54 656 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 ZNF559Q9BR84 538 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 POTEKPQ9BYX7 375 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 EVA1AQ9H8M9 152 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 RPS6KB2Q9UBS0 482 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 TAGLN3Q9UI15 199 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 PROCRQ9UNN8 238 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 TRAPPC4Q9Y296 219 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 TACC2O95359 2948 aa16.25■□□□□ 0.19
PDLIM7-216ENST00000506537 ABCA12Q86UK0 2595 aa16.24■□□□□ 0.19
PDLIM7-216ENST00000506537 IGKV1D-42A0A075B6H8 117 aa16.24■□□□□ 0.19
PDLIM7-216ENST00000506537 A8MVM7 634 aa16.24■□□□□ 0.19
PDLIM7-216ENST00000506537 DNPH1O43598 174 aa16.24■□□□□ 0.19
PDLIM7-216ENST00000506537 PRKD3O94806 890 aa16.24■□□□□ 0.19
PDLIM7-216ENST00000506537 TNFRSF1BP20333 461 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms