RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZNF783Q6ZMS7 281 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 MUC20Q8N307 709 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PXT1Q8NFP0 134 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 OR2A12Q8NGT7 310 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FGF11Q92914 225 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 DPYSL5Q9BPU6 564 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 TINAGL1Q9GZM7 467 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ACTR6Q9GZN1 396 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 WDR13Q9H1Z4 485 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 CWH43Q9H720 699 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 ADAP2Q9NPF8 381 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 FBXO34Q9NWN3 711 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 PLEKHA6Q9Y2H5 1048 aa7.05□□□□□ -1.28
NEDD9-208ENST00000504387 WDR87Q6ZQQ6 2873 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 IRGMA1A4Y4 181 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 UBE2QL1A1L167 161 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 RAB19A4D1S5 217 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF860A6NHJ4 632 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 A8MXK9 166 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 PRKNO60260 465 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-208ENST00000504387 STX11O75558 287 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 IL9P15248 144 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 MMP15P51511 669 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 SRSF3P84103 164 aaKnown RBP7.04□□□□□ -1.28
NEDD9-208ENST00000504387 PITPNAQ00169 270 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 NDUFA9Q16795 377 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 SCGB2B2Q4G0G5 96 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 RAB12Q6IQ22 244 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 WDR88Q6ZMY6 472 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF546Q86UE3 836 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 KREMEN2Q8NCW0 462 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 OR51S1Q8NGJ8 323 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 OR52N1Q8NH53 320 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 FIBINQ8TAL6 211 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ADAMTS15Q8TE58 950 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 CDS1Q92903 461 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 NKD1Q969G9 470 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 OR7D2Q96RA2 312 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 PINK1Q9BXM7 581 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 CA5BQ9Y2D0 317 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 IGLV3-16A0A075B6K0 115 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 SLC5A10A0PJK1 596 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 LRIT2A6NDA9 550 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 SULT1C2O00338 296 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 SLC16A5O15375 505 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 LDOC1O95751 146 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ATP1B1P05026 303 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 F3P13726 295 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 C4BPBP20851 252 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ITPKBP27987 946 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 NTSP30990 170 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 BSGP35613 385 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ART1P52961 327 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 SQSTM1Q13501 440 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 CBFBQ13951 182 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 NKPD1Q17RQ9 610 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 HFEQ30201 348 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 PUS10Q3MIT2 529 aaKnown RBP7.04□□□□□ -1.28
NEDD9-208ENST00000504387 MAMSTRQ6ZN01 415 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF793Q6ZN11 406 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ETV3LQ6ZN32 361 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 RNF44Q7L0R7 432 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 TMPRSS12Q86WS5 348 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 NUP43Q8NFH3 380 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 PAQR8Q8TEZ7 354 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 TFGQ92734 400 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-208ENST00000504387 CXorf40BQ96DE9 158 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 CNRIP1Q96F85 164 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-208ENST00000504387 PTCHD1Q96NR3 888 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 TSSK2Q96PF2 358 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 CD180Q99467 661 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 EXO5Q9H790 373 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 TREM1Q9NP99 234 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 KLHL28Q9NXS3 571 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 ADAM18Q9Y3Q7 739 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 VWA8A3KMH1 1905 aa7.04□□□□□ -1.28
NEDD9-208ENST00000504387 OR6C68A6NDL8 312 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TTLL8A6PVC2 850 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 F5H5P2 479 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 F8W036 122 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 M0QYG6 137 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 NDUFS4O43181 175 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TXNL1O43396 289 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 NDUFA2O43678 99 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SELENOFO60613 162 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ZIC2O95409 532 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SPP1P10451 314 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 GTF2F2P13984 249 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 TIMP2P16035 220 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SYN1P17600 705 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CERS1P27544 350 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 CCR2P41597 374 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 SNRPEP62304 92 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 FOXK2Q01167 660 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF85Q03923 595 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 PAN3Q58A45 887 aaKnown RBP7.03□□□□□ -1.28
NEDD9-208ENST00000504387 MANEAQ5SRI9 462 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 FAM69AQ5T7M9 428 aa7.03□□□□□ -1.28
NEDD9-208ENST00000504387 IKBIPQ70UQ0 350 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms