RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PPP1R16AQ96I34 528 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 IL17FQ96PD4 163 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 FEVQ99581 238 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 P2RY13Q9BPV8 354 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 CHST5Q9GZS9 411 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 KATNBL1Q9H079 304 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 ARL6Q9H0F7 186 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 METTL8Q9H825 291 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 MEAF6Q9HAF1 191 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF226Q9NYT6 803 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 MED11Q9P086 117 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 HCN3Q9P1Z3 774 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 CKLFQ9UBR5 152 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 KCNK6Q9Y257 313 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 SCN10AQ9Y5Y9 1956 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 E7EQ34 232 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 NME4O00746 187 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 TNFSF12O43508 249 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 B4GALT2O60909 372 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC35E2BP0CK96 405 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 IDSP22304 550 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 DNASE1P24855 282 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PSMB5P28074 263 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 DDTP30046 118 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PRDX3P30048 256 aaKnown RBP3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 VEGFCP49767 419 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 DNAJB13P59910 316 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PSMA6P60900 246 aaKnown RBP3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 IL10RBQ08334 325 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 RAB35Q15286 201 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 MPPED2Q15777 294 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SMN1Q16637 294 aaKnown RBP3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 AMZ1Q400G9 498 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 RFTN2Q52LD8 501 aaPredicted RBP3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF678Q5SXM1 525 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 NCMAPQ5T1S8 102 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 RNLSQ5VYX0 342 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 ABHD13Q7L211 337 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CBLN2Q8IUK8 224 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CILP2Q8IUL8 1156 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CLECL1Q8IZS7 167 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 IQCF1Q8N6M8 205 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 ACVR1CQ8NER5 493 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CD300LFQ8TDQ1 290 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 HMGB4Q8WW32 186 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 ARNTL2Q8WYA1 636 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 OR8D1Q8WZ84 308 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 WNT2BQ93097 391 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC25A28Q96A46 364 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 ARSGQ96EG1 525 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 LRCH3Q96II8 777 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SMIM8Q96KF7 97 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 LRR1Q96L50 414 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF285Q96NJ3 590 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PRAP1Q96NZ9 151 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 HHIPQ96QV1 700 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PRRT1Q99946 306 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PAAF1Q9BRP4 392 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 ADAT1Q9BUB4 502 aaKnown RBP3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 MAGEH1Q9H213 219 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 OR51I1Q9H343 314 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 GAL3ST2Q9H3Q3 398 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SIRT7Q9NRC8 400 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 VNN3Q9NY84 501 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 NLGN3Q9NZ94 848 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 GLS2Q9UI32 602 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 DNAJC15Q9Y5T4 150 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 URADA6NGE7 173 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM171A2A8MVW0 826 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 FAM157AC9JC47 383 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 H7C2Y5 167 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 M0R233 179 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 AGPAT2O15120 278 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PRICKLE3O43900 615 aaPredicted RBP3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SRPX2O60687 465 aaPredicted RBP3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CDC14BO60729 498 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 IFNA7P01567 189 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 HLA-DQB1P01920 261 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CD2P06729 351 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 OR2T7P0C7T2 308 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC2A1P11166 492 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SPTBP11277 2137 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 ANXA7P20073 488 aaKnown RBP3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 RAB4AP20338 218 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CD72P21854 359 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 GADD45AP24522 165 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 IGFALSP35858 605 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CD96P40200 585 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 GRK6P43250 576 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC6A9P48067 706 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 CRISP3P54108 245 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 FOXA1P55317 472 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 KIAA1024LP59773 190 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 SH3BP2P78314 561 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PRR5P85299 388 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 NHLH2Q02577 135 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 POU4F2Q12837 409 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 FGL2Q14314 439 aa3.41□□□□□ -1.86
PCDH11X-208ENST00000504220 PCGF3Q3KNV8 242 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms