RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 USP22Q9UPT9 525 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 TRAPPC4Q9Y296 219 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 EMC9Q9Y3B6 208 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 CACNA1CQ13936 2221 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 CCT8L1PA6NM43 557 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 SMAD9O15198 467 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 CD247P20963 164 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 HTR2AP28223 471 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 UQCRC1P31930 480 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 PEX19P40855 299 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 SLC7A2P52569 658 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 CTBP2P56545 445 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 RGS8P57771 180 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 NRF1Q16656 503 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 GKAP1Q5VSY0 366 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 C6orf89Q6UWU4 347 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 LUZP2Q86TE4 346 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 MCEMP1Q8IX19 187 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 OR52E4Q8NGH9 312 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 OR6K3Q8NGY3 331 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 RASSF5Q8WWW0 418 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 WFDC6Q9BQY6 131 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 ZNF559Q9BR84 538 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 RBM24Q9BX46 236 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 TRIM2Q9C040 744 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 TMEM181Q9P2C4 612 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 ADAM21Q9UKJ8 722 aa16.27■□□□□ 0.2
PDLIM7-209ENST00000503346 ELOVL7A1L3X0 281 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 ZC3H12DA2A288 527 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 A8MVM7 634 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 TMEM229AB2RXF0 380 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 NME4O00746 187 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 NDUFAB1O14561 156 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 CYTIPO60759 359 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 FMO6PO60774 539 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 PRKD3O94806 890 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 FESP07332 822 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 IMPDH2P12268 514 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 AGTR1P30556 359 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 PCYT1AP49585 367 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 NCALDP61601 193 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 LIPEQ05469 1076 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 RANBP3LQ86VV4 465 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 MICU2Q8IYU8 434 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 SLC26A7Q8TE54 656 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 ZHX1-C8orf76Q96EF9 292 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 TACO1Q9BSH4 297 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 BCO1Q9HAY6 547 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 SLC24A3Q9HC58 644 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 PLSCR4Q9NRQ2 329 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 KLHL9Q9P2J3 617 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 KLHL13Q9P2N7 655 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 ABCD2Q9UBJ2 740 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 RPS6KB2Q9UBS0 482 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 ING1Q9UK53 422 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 PROCRQ9UNN8 238 aa16.26■□□□□ 0.19
PDLIM7-209ENST00000503346 UNC79Q9P2D8 2635 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 IGHV3-15A0A0B4J1V0 119 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 A0A1B0GWA3 101 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 M0R3H8 397 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 TPST2O60704 377 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 NPIPB7O75200 414 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 SMNDC1O75940 238 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 KLK2P20151 261 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 CPA2P48052 419 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 PSME3P61289 254 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 SORDQ00796 357 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 ABLIM2Q6H8Q1 611 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 KIF18BQ86Y91 864 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 STK35Q8TDR2 534 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 DNAJA4Q8WW22 397 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 PSD2Q9BQI7 771 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 PRR14Q9BWN1 585 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 OPN3Q9H1Y3 402 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 TMEM27Q9HBJ8 222 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 GALNT8Q9NY28 637 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 TAGLN3Q9UI15 199 aa16.25■□□□□ 0.19
PDLIM7-209ENST00000503346 CYSRT1A8MQ03 144 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 EIF1BO60739 113 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 IFNA14P01570 189 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 YES1P07947 543 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 PNMTP11086 282 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 KDELR2P33947 212 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 IDUAP35475 653 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 OR2B6P58173 313 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 SLC35A1P78382 337 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 H3F3AP84243 136 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 RASGEF1BQ0VAM2 473 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 BNIP2Q12982 314 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 PDK3Q15120 406 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 OR1Q1Q15612 314 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 NPTX1Q15818 432 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 ALG10BQ5I7T1 473 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 TMEM201Q5SNT2 666 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 ULK3Q6PHR2 472 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 ZNF474Q6S9Z5 364 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 LSRQ86X29 649 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 TUSC5Q8IXB3 177 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 ZNF295-AS1Q8N0V1 137 aa16.24■□□□□ 0.19
PDLIM7-209ENST00000503346 ZNF610Q8N9Z0 462 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms