RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 NMNAT1Q9HAN9 279 aaPredicted RBP4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 SMURF2Q9HAU4 748 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 PNPLA3Q9NST1 481 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 ACER3Q9NUN7 267 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 FAM118AQ9NWS6 357 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 OCIAD1Q9NX40 245 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 SIDT1Q9NXL6 827 aaKnown RBP4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 SLC39A1Q9NY26 324 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 VNN3Q9NY84 501 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 COPS7AQ9UBW8 275 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 KCND3Q9UK17 655 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 CDC42EP3Q9UKI2 254 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 NXT1Q9UKK6 140 aaKnown RBP4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 CBLCQ9ULV8 474 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 MGAT4BQ9UQ53 548 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 ZNF443Q9Y2A4 671 aaPredicted RBP4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 POFUT2Q9Y2G5 429 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 CLDN16Q9Y5I7 305 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 MAGED1Q9Y5V3 778 aaPredicted RBP4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 HSPE1-MOB4S4R3N1 261 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 PCNX1Q96RV3 2341 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 CELSR1Q9NYQ6 3014 aa4.86□□□□□ -1.63
HMGXB4-208ENST00000498325 SCN2AQ99250 2005 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 UNC13CQ8NB66 2214 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 NAV3Q8IVL0 2385 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 HIVEP1P15822 2718 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 C2orf92A0A1B0GVN3 265 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 GXYLT2A0PJZ3 443 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 PMS2P1A4D2B8 440 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OR2W5A6NFC9 320 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 PRAMEF25A6NGN4 478 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 AGAP5A6NIR3 686 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 VSTM2BA6NLU5 285 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 C9J4A7 227 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 J3KTA2 159 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 M0R3H8 397 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 PCDH17O14917 1159 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 KIAA0513O60268 411 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OR10H3O60404 316 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ALOX12BO75342 701 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 NME6O75414 186 aaPredicted RBP4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OR5F1O95221 314 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 MT-CO3P00414 261 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 IGHEP01854 428 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 CT45A8P0DMV1 189 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 CT45A9P0DMV2 189 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ITGAMP11215 1152 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 HPGDP15428 266 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 RPS4Y1P22090 263 aaKnown RBP4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 PTGS2P35354 604 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 KRT20P35900 424 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 PIGAP37287 484 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 RPL5P46777 297 aaKnown RBP4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 RFX3P48380 749 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ATP12AP54707 1039 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 SLC37A1P57057 533 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 IL13RA1P78552 427 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 COX10Q12887 443 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 KEAP1Q14145 624 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 TRAM2Q15035 370 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 CT45A2Q5DJT8 189 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 FGD3Q5JSP0 725 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 CCNJQ5T5M9 372 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 DCAF12Q5T6F0 453 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 FOXB2Q5VYV0 432 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 FAHD1Q6P587 224 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 TTC33Q6PID6 262 aaPredicted RBP4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 B3GNT6Q6ZMB0 384 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 COX15Q7KZN9 410 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OLIG3Q7RTU3 272 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ZNF550Q7Z398 422 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 PRIMA1Q86XR5 153 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 GRAMD2AQ8IUY3 354 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 CMIPQ8IY22 773 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 PRSS58Q8IYP2 241 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OFCC1Q8IZS5 231 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 HS3ST5Q8IZT8 346 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ZNF527Q8NB42 609 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OR4C15Q8NGM1 316 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OR6T1Q8NGN1 323 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OR52J3Q8NH60 311 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 C16orf52Q8NHV5 167 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 SLC2A12Q8TD20 617 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ZNF721Q8TF20 911 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 SSC4DQ8WTU2 575 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 APOBEC4Q8WW27 367 aaKnown RBP4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 TSLPQ969D9 159 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 MIB2Q96AX9 1013 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 HSPBAP1Q96EW2 488 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 FEVQ99581 238 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 LPAR4Q99677 370 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 MCHR1Q99705 422 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 APOL4Q9BPW4 351 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ZNF559Q9BR84 538 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ITPAQ9BY32 194 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 OR8D2Q9GZM6 311 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 VN1R1Q9GZP7 353 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 ING2Q9H160 280 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 SLC26A1Q9H2B4 701 aa4.85□□□□□ -1.63
HMGXB4-208ENST00000498325 RIBC2Q9H4K1 309 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms