RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 OR2AP1Q8NGE2 309 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 ST8SIA1Q92185 356 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 N4BP2L2Q92802 583 aaPredicted RBP2.92□□□□□ -1.94
SMC4-225ENST00000497203 UBE2E3Q969T4 207 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 PGLYRP4Q96LB8 373 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 RNF126Q9BV68 326 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 GCOM2Q9BZD3 368 aaPredicted RBP2.92□□□□□ -1.94
SMC4-225ENST00000497203 SLITRK2Q9H156 845 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 ZDHHC11Q9H8X9 412 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 MARCH5Q9NX47 278 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 CD274Q9NZQ7 290 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 BTNL2Q9UIR0 455 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 ADAM28Q9UKQ2 775 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 TMCO1Q9UM00 188 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 HPCAL4Q9UM19 191 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 SH3TC1Q8TE82 1336 aa2.92□□□□□ -1.94
SMC4-225ENST00000497203 VSTM2BA6NLU5 285 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 ZFP92A6NM28 416 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 SNTNA6NMZ2 147 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 E7ENQ6 273 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 ZNF264O43296 627 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 UGT1A9O60656 530 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 FCMRO60667 390 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 ATP5LO75964 103 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 SNAPINO95295 136 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 TSPAN12O95859 305 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 LY6G6DO95868 133 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 PCMT1P22061 227 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 HMGB2P26583 209 aaKnown RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 CCR1P32246 355 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 PTGDSP41222 190 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 DUSP3P51452 185 aaPredicted RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 PKNOX1P55347 436 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 RPS8P62241 208 aaKnown RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 EGFEM1PQ0D2K5 195 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 DDX39BQ13838 428 aaKnown RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 IMMTQ16891 758 aaKnown RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 SAMD4BQ5PRF9 694 aaKnown RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 UNQ9370/PRO34162Q6UXP9 181 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 HSDL2Q6YN16 418 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 NBPF5PQ86XG9 351 aaPredicted RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 TGIF2LXQ8IUE1 241 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 OR2L13Q8N349 312 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 TMEM252Q8N6L7 170 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 CCDC71LQ8N9Z2 235 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 SCFD1Q8WVM8 642 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 DNAJA4Q8WW22 397 aaPredicted RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 C10orf35Q96D05 121 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 CXorf40BQ96DE9 158 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 CNOT6LQ96LI5 555 aaKnown RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 SLC38A2Q96QD8 506 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 MYCBPQ99417 103 aaPredicted RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 KLHDC3Q9BQ90 382 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 SELENOIQ9C0D9 397 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 REEP4Q9H6H4 257 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 VCPKMTQ9H867 229 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 YY1AP1Q9H869 796 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 BFARQ9NZS9 450 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 B4GALT7Q9UBV7 327 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 IFT52Q9Y366 437 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 RPL36Q9Y3U8 105 aaKnown RBP2.91□□□□□ -1.94
SMC4-225ENST00000497203 ASB3Q9Y575 518 aa2.91□□□□□ -1.94
SMC4-225ENST00000497203 IQANK1A0A1B0GTG1 560 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 A8MXQ7 604 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 H0Y8G0 127 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 K7N7A8 449 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 HDAC3O15379 428 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 NBR2O15453 112 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 HCRTR1O43613 425 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 TIMM8AO60220 97 aaPredicted RBP2.9□□□□□ -1.95
SMC4-225ENST00000497203 RAMP3O60896 148 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 BBOX1O75936 387 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 IGHV3-48P01763 117 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 GABRR1P24046 479 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 ZBTB25P24278 435 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 IL12AP29459 219 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 AQP1P29972 269 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 HTR1FP30939 366 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 UGT1A5P35504 534 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 SULT1E1P49888 294 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 CDH4P55283 916 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 OGDHQ02218 1023 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 KLF17Q5JT82 389 aaPredicted RBP2.9□□□□□ -1.95
SMC4-225ENST00000497203 C9orf129Q5T035 196 aaKnown RBP2.9□□□□□ -1.95
SMC4-225ENST00000497203 PDZK1Q5T2W1 519 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 C11orf71Q6IPW1 123 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 VRK2Q86Y07 508 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 PRR22Q8IZ63 422 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 FTMTQ8N4E7 242 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 ALLCQ8N6M5 410 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 CATSPER1Q8NEC5 780 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 OR1E3Q8WZA6 343 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 TBX15Q96SF7 602 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 NPY6RQ99463 290 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 HIST1H4GQ99525 98 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 EBF4Q9BQW3 602 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 RBKSQ9H477 322 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 AZI2Q9H6S1 392 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 FOLH1BQ9HBA9 442 aa2.9□□□□□ -1.95
SMC4-225ENST00000497203 SH2D2AQ9NP31 389 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms