RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 CCNB2O95067 398 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 CCNA2P20248 432 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 PTNP21246 168 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 UGT2B15P54855 530 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 SEC23BQ15437 767 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 C3orf33Q6P1S2 294 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 PODNL1Q6PEZ8 512 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 SHQ1Q6PI26 577 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 TBPL2Q6SJ96 375 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 FAM180AQ6UWF9 173 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 TRILQ7L0X0 811 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 RRM2BQ7LG56 351 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 NEIL3Q8TAT5 605 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 GIPC3Q8TF64 312 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 TMEM239Q8WW34 195 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 HS6ST2Q96MM7 605 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 BARD1Q99728 777 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 SLC29A1Q99808 456 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 TMEM43Q9BTV4 400 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 SERINC1Q9NRX5 453 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 SLC6A5Q9Y345 797 aa12.59□□□□□ -0.39
ATPAF2-208ENST00000496852 TRGV5A0A0B4J1U4 118 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 A0A1B0GVC2 190 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 SH3PXD2BA1X283 911 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 ZC3H12DA2A288 527 aaKnown RBP12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 NPIPA5E9PKD4 350 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 H3BML4 177 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 EI24O14681 340 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 HCN1O60741 890 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 NPIPB7O75200 414 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 RAC1P63000 192 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 NHSL2Q5HYW2 709 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 TTC33Q6PID6 262 aaPredicted RBP12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 IZUMO2Q6UXV1 221 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 EPHX4Q8IUS5 362 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 CISD2Q8N5K1 135 aaKnown RBP12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 ATG16L2Q8NAA4 619 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 OR10G2Q8NGC3 310 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 STK35Q8TDR2 534 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 SLC25A43Q8WUT9 341 aaPredicted RBP12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 SLC19A3Q9BZV2 496 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 SMURF2Q9HAU4 748 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 NPIPA1Q9UND3 350 aa12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 SPIN1Q9Y657 262 aaPredicted RBP12.58□□□□□ -0.4
ATPAF2-208ENST00000496852 A8MVM7 634 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 ATXN7O15265 892 aaPredicted RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 PIP5K1CO60331 668 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 OR10H3O60404 316 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 PEPDP12955 493 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 FKBP2P26885 142 aaKnown RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 SHC1P29353 583 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 GCKP35557 465 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 MICAQ29983 383 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 SYT14P1Q58G82 188 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 ZNF730Q6ZMV8 503 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 MBOAT2Q6ZWT7 520 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 P3H2Q8IVL5 708 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 RNF113BQ8IZP6 322 aaKnown RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 OR4K5Q8NGD3 323 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 FAR1Q8WVX9 515 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 SNRNP40Q96DI7 357 aaKnown RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 NRBF2Q96F24 287 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 OR11A1Q9GZK7 315 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 LDAHQ9H6V9 325 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 AP4B1Q9Y6B7 739 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 COL6A6A6NMZ7 2263 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 ACTL6AO96019 429 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 IGF2P01344 180 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 POU2F1P14859 743 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 BMP7P18075 431 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 STARP49675 285 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 CLK1P49759 484 aaKnown RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 LHX2P50458 406 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 TDGF1P3P51864 188 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 CRYZQ08257 329 aaKnown RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 PRR30Q53SZ7 412 aaPredicted RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 ANKRD34AQ69YU3 496 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 VASNQ6EMK4 673 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 ZNF770Q6IQ21 691 aaPredicted RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 C5orf46Q6UWT4 87 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 GGNQ86UU5 652 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 NRMQ8IXM6 262 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 ATP6V1C2Q8NEY4 427 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 OR9Q2Q8NGE9 314 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 PFN4Q8NHR9 129 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 DDIT4LQ96D03 193 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 KTI12Q96EK9 354 aaPredicted RBP12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 ARL5BQ96KC2 179 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 GPR137Q96N19 417 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 PSD2Q9BQI7 771 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 POTEKPQ9BYX7 375 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 TMEM185BQ9H7F4 350 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 C20orf141Q9NUB4 165 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 SPRR3Q9UBC9 169 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 MED31Q9Y3C7 131 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 ORC6Q9Y5N6 252 aa12.57□□□□□ -0.4
ATPAF2-208ENST00000496852 MED12LQ86YW9 2145 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms