RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CCR4P51679 360 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 AFF3P51826 1226 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 RPS4XP62701 263 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 SCN1BQ07699 218 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 GGTLC2Q14390 218 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 ELAVL1Q15717 326 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 ELOA3BQ3SY89 546 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 PTCRAQ6ISU1 281 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 MZT2AQ6P582 158 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 ARL9Q6T311 187 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 DPY19L2P2Q6ZN68 376 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 VASH1Q7L8A9 365 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 D2HGDHQ8N465 521 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 POMGNT2Q8NAT1 580 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 ELOA3Q8NG57 546 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 PHOSPHO1Q8TCT1 267 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 LCORQ96JN0 433 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 CNN2Q99439 309 aaKnown RBP11.95□□□□□ -0.5
GARNL3-220ENST00000496711 RNF32Q9H0A6 362 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 LRRN3Q9H3W5 708 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 CLCA3PQ9Y6N3 262 aa11.95□□□□□ -0.5
GARNL3-220ENST00000496711 TRIOO75962 3097 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 IGKV1D-42A0A075B6H8 117 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 J3QLW9 94 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 BCAT2O15382 392 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF264O43296 627 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 OIP5O43482 229 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 PLPP2O43688 288 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 UTS2O95399 124 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 IGF2P01344 180 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 IGKV3-11P04433 115 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 GLB1P16278 677 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF19P17023 458 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 CFHR1Q03591 330 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 LGALS3BPQ08380 585 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 SNAP47Q5SQN1 464 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 ATG4DQ86TL0 474 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-220ENST00000496711 SLC35F3Q8IY50 421 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 GPR135Q8IZ08 494 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 CELF2-AS1Q8N7Q2 184 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 ZBTB8BQ8NAP8 495 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-220ENST00000496711 C7orf57Q8NEG2 295 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF721Q8TF20 911 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 DNASE2BQ8WZ79 361 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 HLA-CQ95604 372 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 TMEM43Q9BTV4 400 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 ERVMER34-1Q9H9K5 563 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 ADAM18Q9Y3Q7 739 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 NOX1Q9Y5S8 564 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 UNC13CQ8NB66 2214 aa11.94□□□□□ -0.5
GARNL3-220ENST00000496711 TCRBV16S1A1N1A0A5B0 115 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 E9PI62 339 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 DVL2O14641 736 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ARPC3O15145 178 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 HPGDSO60760 199 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 DDAH2O95865 285 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 PRPS1P60891 318 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ACTA2P62736 377 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ACTG2P63267 376 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 GPLD1P80108 840 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ISXQ2M1V0 245 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 CNIH2Q6PI25 160 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 PRSS42Q7Z5A4 293 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 NRARPQ7Z6K4 114 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 AKAP14Q86UN6 197 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ADIPOR1Q96A54 375 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ZMYND19Q96E35 227 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-220ENST00000496711 GAL3ST4Q96RP7 486 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 GPX7Q96SL4 187 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF304Q9HCX3 659 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 NRIP3Q9NQ35 241 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 SACM1LQ9NTJ5 587 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 SEMA5BQ9P283 1151 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ADAM30Q9UKF2 790 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ASXL3Q9C0F0 2248 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 TFP02787 698 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 CSF3P09919 207 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 TPTEP56180 551 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 OR12D2P58182 307 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 DCAF7P61962 342 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 E2F1Q01094 437 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 CBX3Q13185 183 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ASAH1Q13510 395 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 TAB1Q15750 504 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.93□□□□□ -0.5
GARNL3-220ENST00000496711 GXYLT1Q4G148 440 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 PYDC2Q56P42 97 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 WDR45BQ5MNZ6 344 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 PRAMEF17Q5VTA0 474 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 METAP1DQ6UB28 335 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-220ENST00000496711 CBLN3Q6UW01 205 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 SPATC1Q76KD6 591 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 SSX6Q7RTT6 188 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 KMT5CQ86Y97 462 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 RFLNBQ8N5W9 214 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 Q8N9G6 341 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-220ENST00000496711 NLGN4YQ8NFZ3 816 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-220ENST00000496711 OR5J2Q8NH18 312 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 OR14A16Q8NHC5 309 aa11.93□□□□□ -0.5
GARNL3-220ENST00000496711 SMAP2Q8WU79 429 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms