RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-222	ENST00000496574	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	CIB4	A0PJX0	185 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	FKTN	O75072	461 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	FBXO24	O75426	580 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	PLG	P00747	810 aa	Predicted RBP	13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	CDK2	P24941	298 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	HOXA9	P31269	272 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	RPS10	P46783	165 aa	Known RBP	13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	AADACL4	Q5VUY2	407 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	AWAT2	Q6E213	333 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	TMEM200A	Q86VY9	491 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	IFNL1	Q8IU54	200 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	OR6N1	Q8NGY5	312 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	OR52I2	Q8NH67	350 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	SCGB1C1	Q8TD33	95 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	HIST1H2AA	Q96QV6	131 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	SULT4A1	Q9BR01	284 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	CHST8	Q9H2A9	424 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	LIN7B	Q9HAP6	207 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	SLC6A20	Q9NP91	592 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	CYP8B1	Q9UNU6	501 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574		A0A0B4J2A0	478 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	SLC6A12	P48065	614 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	CSNK2A1	P68400	391 aa	Predicted RBP	13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	CCSMST1	Q4G0I0	132 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	FAM209A	Q5JX71	171 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	ZNF776	Q68DI1	518 aa	Predicted RBP	13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	STEAP1B	Q6NZ63	245 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	UNQ6126/PRO20091	Q6UXV3	157 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	NAXE	Q8NCW5	288 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	CSNK2A3	Q8NEV1	391 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	C10orf90	Q96M02	699 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	INTS14	Q96SY0	518 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	SGIP1	Q9BQI5	828 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	R3HDML	Q9H3Y0	253 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	SHPK	Q9UHJ6	478 aa		13.18	□□□□□ -0.3
PKD1-222	ENST00000496574	TSTD3	H0UI37	97 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	LGI1	O95970	557 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	RNH1	P13489	461 aa	Known RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	TYRP1	P17643	537 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	PGF	P49763	221 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	RAB5C	P51148	216 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	ARF3	P61204	181 aa	Predicted RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	ARF1	P84077	181 aa	Known RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	SSX1	Q16384	188 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	MRPL2	Q5T653	305 aa	Known RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	TMPRSS9	Q7Z410	1059 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	SAMD11	Q96NU1	681 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	C12orf57	Q99622	126 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	MYH14	Q7Z406	1995 aa	Known RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	C2orf74	A8MZ97	194 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574		H3BQ06	376 aa	Predicted RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	LAT	O43561	262 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	MPIG6B	O95866	241 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	IGFBP6	P24592	240 aa	Predicted RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	PSMB5	P28074	263 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	CCIN	Q13939	588 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	DPPA4	Q7L190	304 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	LIX1L	Q8IVB5	337 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	TMEM255B	Q8WV15	326 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	TMEM106A	Q96A25	262 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	OR5B12	Q96R08	314 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	GLIPR2	Q9H4G4	154 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	HINT3	Q9NQE9	182 aa	Known RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	ZNF850	A8MQ14	1090 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	SLCO2B1	O94956	709 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	IFNA5	P01569	189 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	GNRHR	P30968	328 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574		Q499Y3	187 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	ZNF385B	Q569K4	471 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	CSNK1A1L	Q8N752	337 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	ANKRD53	Q8N9V6	530 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	OR10R2	Q8NGX6	335 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	TM4SF18	Q96CE8	201 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	DTD2	Q96FN9	168 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	TLR9	Q9NR96	1032 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	PARPBP	Q9NWS1	579 aa		13.17	□□□□□ -0.3
PKD1-222	ENST00000496574	LGALS8	O00214	317 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	EIF4E	P06730	217 aa	Known RBP	13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	NPPB	P16860	134 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	SLC2A5	P22732	501 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	SOX18	P35713	384 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	BLK	P51451	505 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	ZNF679	Q8IYX0	411 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	TNFRSF13C	Q96RJ3	184 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	CWH43	Q9H720	699 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	SMCO4	Q9NRQ5	59 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	TES	Q9UGI8	421 aa	Known RBP	13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	LOXHD1	Q8IVV2	1947 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	ACSM4	P0C7M7	580 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	TIMP2	P16035	220 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	PRKAR1B	P31321	381 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	PDZK1IP1	Q13113	114 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	EIF2B1	Q14232	305 aa	Known RBP	13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	GDF7	Q7Z4P5	450 aa		13.16	□□□□□ -0.3
PKD1-222	ENST00000496574	TMEM234	Q8WY98	164 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms