RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 UBE2KP61086 200 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 TMEM115Q12893 351 aaPredicted RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ENPP2Q13822 863 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SIRPB2Q5JXA9 342 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 FRG2Q64ET8 278 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 FBXO42Q6P3S6 717 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 FAM220AQ7Z4H9 259 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 RABEPKQ7Z6M1 372 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ARRDC1Q8N5I2 433 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ZNF321PQ8N8H1 164 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 OR4F15Q8NGB8 312 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SCLYQ96I15 445 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SEC22AQ96IW7 307 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 FRG2BQ96QU4 278 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CNTNAP3Q9BZ76 1288 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CPEB1Q9BZB8 566 aaKnown RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SLC39A8Q9C0K1 460 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SLC6A16Q9GZN6 736 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 GAL3ST2Q9H3Q3 398 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 TMEM27Q9HBJ8 222 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CRTAC1Q9NQ79 661 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 VPS29Q9UBQ0 182 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 FTSJ1Q9UET6 329 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SIX4Q9UIU6 781 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 AK6Q9Y3D8 172 aaKnown RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 USP3Q9Y6I4 520 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ITGB4P16144 1822 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ARRDC5A6NEK1 342 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 CPSF4LA6NMK7 179 aaKnown RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 DLEU1O43261 78 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 RAMP2O60895 175 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 APBB3O95704 486 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 HOXB5P09067 269 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 HOXA5P20719 270 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 DVL1P1P54792 670 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 MELKQ14680 651 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 TMEM244Q5VVB8 128 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 C11orf87Q6NUJ2 197 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 GLB1L2Q8IW92 636 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 CPXM2Q8N436 756 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 CHST14Q8NCH0 376 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 OR4K5Q8NGD3 323 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 PCYT2Q99447 389 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 SLC25A19Q9HC21 320 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 FGF20Q9NP95 211 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 ACER3Q9NUN7 267 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 POMT1Q9Y6A1 747 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 BORCS7-ASMTA0A0B4J1R7 106 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 FAM72CH0Y354 149 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 MFNGO00587 321 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 BHLHE40O14503 412 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 OR2A4O95047 310 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 RCC1P18754 421 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 SDC1P18827 310 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 TLX1P31314 330 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 SLC26A5P58743 744 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 S100A10P60903 97 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 SHC2P98077 582 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 FAM72AQ5TYM5 149 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 FAM72DQ6L9T8 149 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 KIAA1211LQ6NV74 962 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 FAM72BQ86X60 149 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 ARL14Q8N4G2 192 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 HUS1BQ8NHY5 278 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 THEM6Q8WUY1 208 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 HLA-CQ95604 372 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 OR2A7Q96R45 310 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 NEU1Q99519 415 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 C1QTNF3Q9BXJ4 246 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 ACTL8Q9H568 366 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 ASIC5Q9NY37 505 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 MMACHCQ9Y4U1 282 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 A0A1B0GTL3 188 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 DDTLA6NHG4 134 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 OR52A4PA6NMU1 304 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 RIIAD1A6NNX1 92 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 PRICKLE3O43900 615 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 CYB5AP00167 134 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 PDYNP01213 254 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 HLA-AP01891 365 aaKnown RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 CSN2P05814 226 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 HOXC4P09017 264 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 IDH3GP51553 393 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 OR5I1Q13606 314 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 ZNF345Q14585 488 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 PLEKHN1Q494U1 663 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 AFMIDQ63HM1 303 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 LRRC69Q6ZNQ3 347 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 GPR137CQ8N3F9 429 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 REPS2Q8NFH8 660 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 OR52N2Q8NGI0 321 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 FIBINQ8TAL6 211 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 PHYHIPQ92561 330 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 DTD2Q96FN9 168 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 HAPLN2Q9GZV7 340 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 SLC32A1Q9H598 525 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 ATG4BQ9Y4P1 393 aa7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 MRPL42Q9Y6G3 142 aaKnown RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 TP53BP1Q12888 1972 aaPredicted RBP7.62□□□□□ -1.19
CRNKL1-205ENST00000496549 GPR39O43194 453 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms