RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CADM4Q8NFZ8 388 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 ABHD4Q8TB40 342 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 C3orf49Q96BT1 292 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 YIPF2Q9BWQ6 316 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 SPRTNQ9H040 489 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 PCED1AQ9H1Q7 454 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 UBQLN4Q9NRR5 601 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 MRTO4Q9UKD2 239 aaKnown RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 ZMIZ1Q9ULJ6 1067 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 MMACHCQ9Y4U1 282 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 TMEM184BQ9Y519 407 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 GON4LQ3T8J9 2241 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 ELOA3DA6NLF2 546 aaPredicted RBP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 RHPN2P1A8MT19 583 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 E9PI62 339 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 LMO7DNF2Z398 122 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 SCDO00767 359 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 ARPC3O15145 178 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 IDH3BO43837 385 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 OR7A10O76100 309 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 IGF2P01344 180 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 SHC1P29353 583 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 GRK6P43250 576 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 NRG3P56975 720 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 CSTF1Q05048 431 aaKnown RBP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 QPRTQ15274 297 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 P2RY14Q15391 338 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 ISXQ2M1V0 245 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 DEFB133Q30KQ1 61 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 ELOA3BQ3SY89 546 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 C14orf28Q4W4Y0 310 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 SLC35D3Q5M8T2 416 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 DMKNQ6E0U4 476 aaPredicted RBP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 MED25Q71SY5 747 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 SYS1Q8N2H4 156 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 C7orf57Q8NEG2 295 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 NLGN4YQ8NFZ3 816 aaPredicted RBP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 ELOA3Q8NG57 546 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 OR6F1Q8NGZ6 308 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 ZMYND19Q96E35 227 aaPredicted RBP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 SENP5Q96HI0 755 aaPredicted RBP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 PGLYRP3Q96LB9 341 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 FRMD6Q96NE9 622 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 SLC46A1Q96NT5 459 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 UBL7Q96S82 380 aaPredicted RBP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 TTYH2Q9BSA4 534 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 MMP28Q9H239 520 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 MARCH7Q9H992 704 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 PNO1Q9NRX1 252 aaKnown RBP10.15□□□□□ -0.78
CMSS1-208ENST00000496116 CUTCQ9NTM9 273 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 MALT1Q9UDY8 824 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 MAU2Q9Y6X3 613 aa10.15□□□□□ -0.78
CMSS1-208ENST00000496116 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.15□□□□□ -0.79
CMSS1-208ENST00000496116 DVL2O14641 736 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 PLA2G10O15496 165 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 SC5DO75845 299 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 CLPSP04118 112 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 UBL4AP11441 157 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 MAOBP27338 520 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 RORAP35398 523 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 ACVR1BP36896 505 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 MAP2K3P46734 347 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 GBX2P52951 348 aaPredicted RBP10.15□□□□□ -0.79
CMSS1-208ENST00000496116 E2F1Q01094 437 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 DBPQ10586 325 aaPredicted RBP10.15□□□□□ -0.79
CMSS1-208ENST00000496116 MADCAM1Q13477 382 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 SFXN4Q6P4A7 337 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 PLET1Q6UQ28 207 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 PXKQ7Z7A4 578 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 SLC35F2Q8IXU6 374 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 LRRC17Q8N6Y2 441 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 SCAIQ8N9R8 606 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 TEX19Q8NA77 164 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 FAM71CQ8NEG0 241 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 C17orf47Q8NEP4 570 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 SNX33Q8WV41 574 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 MVB12AQ96EY5 273 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 OR1F2PQ96R84 312 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 RNF121Q9H920 327 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 NEK6Q9HC98 313 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 NRIP3Q9NQ35 241 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 EXOSC3Q9NQT5 275 aaKnown RBP10.15□□□□□ -0.79
CMSS1-208ENST00000496116 KLHL1Q9NR64 748 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 EXTL2Q9UBQ6 330 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 CA14Q9ULX7 337 aa10.15□□□□□ -0.79
CMSS1-208ENST00000496116 MRPS17Q9Y2R5 130 aaKnown RBP10.15□□□□□ -0.79
CMSS1-208ENST00000496116 HMX3A6NHT5 357 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 B4DXG7 233 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 OR2B3O76000 313 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 IL33O95760 270 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 ELK1P19419 428 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 POU3F3P20264 500 aaPredicted RBP10.14□□□□□ -0.79
CMSS1-208ENST00000496116 ALAS2P22557 587 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 PPICP45877 212 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 ARL4DP49703 201 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 CCR4P51679 360 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 SLC37A1P57057 533 aa10.14□□□□□ -0.79
CMSS1-208ENST00000496116 RPL6Q02878 288 aaKnown RBP10.14□□□□□ -0.79
CMSS1-208ENST00000496116 ACSM3Q53FZ2 586 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms