RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 UGT2A1Q9Y4X1 527 aa3.19□□□□□ -1.9
NCKAP1-208ENST00000495619 LTBP1Q14766 1721 aa3.19□□□□□ -1.9
NCKAP1-208ENST00000495619 PIK3R4Q99570 1358 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 IGLV4-60A0A075B6I1 120 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 SYNJ2BP-COX16A0A087WUM0 186 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 VGLL3A8MV65 326 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 PEX11AO75192 247 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 GUCA1CO95843 209 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 ADRB3P13945 408 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 AP3M2P53677 418 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 PRPS1P60891 318 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 GPNMBQ14956 572 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 ARL6IP1Q15041 203 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 CCDC57Q2TAC2 916 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 C1orf146Q5VVC0 180 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 KIR3DL3Q8N743 410 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 FAM151AQ8WW52 585 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 ZNF75CPQ92670 426 aaPredicted RBP3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 C12orf66Q96MD2 445 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 ZNF396Q96N95 335 aaPredicted RBP3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 FOPNLQ96NB1 174 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 TPPP3Q9BW30 176 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 RIBC2Q9H4K1 309 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 SMYD3Q9H7B4 428 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 ZNHIT6Q9NWK9 470 aaKnown RBP3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 ZMAT5Q9UDW3 170 aaKnown RBP3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 CHRNA9Q9UGM1 479 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 PSG11Q9UQ72 335 aa3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 CENPJQ9HC77 1338 aaPredicted RBP3.18□□□□□ -1.9
NCKAP1-208ENST00000495619 IGLV4-69A0A075B6H9 119 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 TMX2-CTNND1H3BSU7 103 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 ZNF780AO75290 641 aaPredicted RBP3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 MED6O75586 246 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 CA1P00915 261 aaPredicted RBP3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 HSPA5P11021 654 aaKnown RBP3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 SFTPCP11686 197 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 PJVKQ0ZLH3 352 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 UNC119Q13432 240 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 SELPLGQ14242 412 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 TAF7Q15545 349 aaPredicted RBP3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 SLC36A3Q495N2 470 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 GGTA1PQ4G0N0 100 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 PYHIN1Q6K0P9 492 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 CLDN19Q8N6F1 224 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 OR2T34Q8NGX1 318 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 PAQR8Q8TEZ7 354 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 FAM3CQ92520 227 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 C7orf34Q96L11 122 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 OMDQ99983 421 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 TMEM117Q9H0C3 514 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 FARSBQ9NSD9 589 aaKnown RBP3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 TREM2Q9NZC2 230 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 TMOD2Q9NZR1 351 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 WARS2Q9UGM6 360 aaKnown RBP3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 SH3BGRL2Q9UJC5 107 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 RASD1Q9Y272 281 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 OR10H1Q9Y4A9 318 aa3.17□□□□□ -1.9
NCKAP1-208ENST00000495619 TCP11X1B4DZS4 312 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 H0YC42 278 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 BTN3A3O00478 584 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 NDC80O14777 642 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 CASQ2O14958 399 aaPredicted RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 RS1O15537 224 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 TRAF3IP2O43734 574 aaPredicted RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 KLHL41O60662 606 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 TBX19O60806 448 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 NOL3O60936 208 aaKnown RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 BCAS1O75363 584 aaPredicted RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 ADCY5O95622 1261 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 GNA14O95837 355 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 SLC25A27O95847 323 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 PCCBP05166 539 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 TPM3P06753 285 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 EPB41P11171 864 aaKnown RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 RCC1P18754 421 aaPredicted RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 CA8P35219 290 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 LONP1P36776 959 aaKnown RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 PAX5Q02548 391 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 MXD4Q14582 209 aaPredicted RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 NADK2Q4G0N4 442 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 TSPO2Q5TGU0 170 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 CCDC137Q6PK04 289 aaKnown RBP3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 BLOC1S2Q6QNY1 142 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 KDELC1Q6UW63 502 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 LRRC31Q6UY01 552 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 TPRA1Q86W33 373 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 ZDHHC21Q8IVQ6 265 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 TBC1D21Q8IYX1 336 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 ZNF540Q8NDQ6 660 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 OR51G1Q8NGK1 321 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 OR6X1Q8NH79 312 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 ZNF606Q8WXB4 792 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 RASL11BQ9BPW5 248 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 LZTS2Q9BRK4 669 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 ZNF670Q9BS34 389 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 RHBGQ9H310 441 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 NUDT15Q9NV35 164 aa3.16□□□□□ -1.9
NCKAP1-208ENST00000495619 MTRF1LQ9UGC7 380 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms