RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 LRRC69Q6ZNQ3 347 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 GPR155Q7Z3F1 870 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 ELMOD2Q8IZ81 293 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 DVL3Q92997 716 aaPredicted RBP12.42□□□□□ -0.42
GPC1-209ENST00000495100 MSANTD3Q96H12 275 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 COX14Q96I36 57 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 ABHD1Q96SE0 405 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 B3GNT4Q9C0J1 378 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 PRTFDC1Q9NRG1 225 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 KCND3Q9UK17 655 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 POLR1DQ9Y2S0 133 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 FXYD6-FXYD2A0A087WZ82 144 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 TRIM64BA6NI03 449 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 CLDN4O14493 209 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 TSPAN4O14817 238 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 SLC25A12O75746 678 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 AKT2P31751 481 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 TPMTP51580 245 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 GPLD1P80108 840 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 SCGB2B2Q4G0G5 96 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 CCDC58Q4VC31 144 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 DPY19L4Q7Z388 723 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 FAM220AQ7Z4H9 259 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 ZPLD1Q8TCW7 415 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.42□□□□□ -0.42
GPC1-209ENST00000495100 ATF6BQ99941 703 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 HDAC8Q9BY41 377 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 FXYD6Q9H0Q3 95 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 Q9N2J8 555 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 NOX4Q9NPH5 578 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 ZSCAN32Q9NX65 697 aa12.42□□□□□ -0.42
GPC1-209ENST00000495100 HMX3A6NHT5 357 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 TPD52L2O43399 206 aaKnown RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 GPR75O95800 540 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 SPARCP09486 303 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 LIMS1P48059 325 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 PITPNBP48739 271 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 AKIRIN2Q53H80 203 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 MFSD9Q8NBP5 474 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 NSMAFQ92636 917 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 AKAP1Q92667 903 aaKnown RBP eCLIP12.41□□□□□ -0.42
GPC1-209ENST00000495100 PTP4A1Q93096 173 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 FAM46BQ96A09 425 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 MRGPRX1Q96LB2 322 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 SIGLEC11Q96RL6 698 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 SEC22CQ9BRL7 303 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 RNF32Q9H0A6 362 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 RBFOX1Q9NWB1 397 aaKnown RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 KLK11Q9UBX7 282 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 PCDHGB2Q9Y5G2 931 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 HELZP42694 1942 aaKnown RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 DCDC2BA2VCK2 349 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.41□□□□□ -0.42
GPC1-209ENST00000495100 LINC00615Q96LM1 132 aaPredicted RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 TEX101Q9BY14 249 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 PRDM9Q9NQV7 894 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 PLXNA3P51805 1871 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 C2orf74A8MZ97 194 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 ARPC1BO15143 372 aaKnown RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 SEMA4FO95754 770 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 DBIP07108 87 aaKnown RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 GNALP38405 381 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 GFERP55789 205 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 RAB14P61106 215 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 ZP2Q05996 745 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 TOMM20Q15388 145 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 Q5BKY6 102 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 QSOX2Q6ZRP7 698 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 RNF165Q6ZSG1 346 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 KIAA0907Q7Z7F0 614 aaPredicted RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 ZNF527Q8NB42 609 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 MOSPD2Q8NHP6 518 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 RNF170Q96K19 258 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 KCNE5Q9UJ90 142 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 VDAC3Q9Y277 283 aa12.41□□□□□ -0.42
GPC1-209ENST00000495100 LSM2Q9Y333 95 aaKnown RBP12.41□□□□□ -0.42
GPC1-209ENST00000495100 TSPAN11A1L157 253 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 PRICKLE3O43900 615 aaPredicted RBP12.4□□□□□ -0.42
GPC1-209ENST00000495100 MRPS14O60783 128 aaKnown RBP12.4□□□□□ -0.42
GPC1-209ENST00000495100 TNFP01375 233 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 F8A1P23610 371 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 SLC6A6P31641 620 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 ARHGDIBP52566 201 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 TSPAN5P62079 268 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 BEX5Q5H9J7 111 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 KIRREL2Q6UWL6 708 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 JAGN1Q8N5M9 183 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 TNFAIP8L1Q8WVP5 186 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 PPP1R14AQ96A00 147 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 WDR34Q96EX3 536 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 DPYSL5Q9BPU6 564 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 DPAGT1Q9H3H5 408 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 LYARQ9NX58 379 aaKnown RBP12.4□□□□□ -0.42
GPC1-209ENST00000495100 CA14Q9ULX7 337 aa12.4□□□□□ -0.42
GPC1-209ENST00000495100 KIF26BQ2KJY2 2108 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms