RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	OR56B1	Q8NGI3	324 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	SPPL2A	Q8TCT8	520 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	RNASE8	Q8TDE3	154 aa	Known RBP	4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	PPP4R1	Q8TF05	950 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	SEMA4D	Q92854	862 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	HGD	Q93099	445 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	TMEM203	Q969S6	136 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	SENP5	Q96HI0	755 aa	Predicted RBP	4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	C4orf36	Q96KX1	117 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	CAPZA3	Q96KX2	299 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	GPA33	Q99795	319 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	CPNE1	Q99829	537 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	AIF1L	Q9BQI0	150 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLC30A2	Q9BRI3	323 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	BARHL1	Q9BZE3	327 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	ACTL8	Q9H568	366 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	ESRP2	Q9H6T0	727 aa	Known RBP	4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF696	Q9H7X3	374 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF160	Q9HCG1	818 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	TMEM138	Q9NPI0	162 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	DYRK4	Q9NR20	520 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	LYAR	Q9NX58	379 aa	Known RBP	4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	ERAP1	Q9NZ08	941 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	USE1	Q9NZ43	259 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	SMPX	Q9UHP9	88 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	ANAPC7	Q9UJX3	599 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	OR52A1	Q9UKL2	312 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	MOK	Q9UQ07	419 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	PSG11	Q9UQ72	335 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	LIPG	Q9Y5X9	500 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	NPTN	Q9Y639	398 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF609	O15014	1411 aa		4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	POLR1A	O95602	1720 aa	Predicted RBP	4.17	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZMYM4	Q5VZL5	1548 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	NEURL4	Q96JN8	1562 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672		A0A0A6YYC8	382 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672		A0A1W2PNV4	684 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	TCRBV21S2A2	A0A5A6	115 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	TMEM202	A6NGA9	273 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ANKRD61	A6NGH8	418 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ANXA2P2	A6NMY6	339 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	CENPX	A8MT69	81 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	HACD1	B0YJ81	288 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672		I3L1I5	382 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ANKRD28	O15084	1053 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	OGG1	O15527	345 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	LANCL1	O43813	399 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLC22A5	O76082	557 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLCO2B1	O94956	709 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	TDP2	O95551	362 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	MOCS2	O96007	188 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	FAM58BP	P0C7Q3	252 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	C8orf89	P0DMQ9	161 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	IRF1	P10914	325 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	CEBPB	P17676	345 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	EDN2	P20800	178 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	UBA1	P22314	1058 aa	Known RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	GABRR1	P24046	479 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	HLA-DMA	P28067	261 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ARR3	P36575	388 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	DLST	P36957	453 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	RGS4	P49798	205 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	STK19	P49842	368 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	CCR6	P51684	374 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	TMEM33	P57088	247 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	MLF1	P58340	268 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SNAP25	P60880	206 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	EFNB1	P98172	346 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SORD	Q00796	357 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	CD300C	Q08708	224 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	PTP4A2	Q12974	167 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	PDIA2	Q13087	525 aa	Known RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ORC2	Q13416	577 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	BAAT	Q14032	418 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	MTF1	Q14872	753 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	MPPED2	Q15777	294 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ATP6AP1	Q15904	470 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	RFX4	Q33E94	735 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ALKBH6	Q3KRA9	238 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	CDNF	Q49AH0	187 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	GPR33	Q49SQ1	333 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	IFI44L	Q53G44	452 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	C5orf47	Q569G3	176 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	LRIF1	Q5T3J3	769 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	C9orf64	Q5T6V5	341 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	LCE1F	Q5T754	118 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF691	Q5VV52	312 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	C11orf63	Q6NUN7	778 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	LPCAT3	Q6P1A2	487 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	KCTD18	Q6PI47	426 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	NCEH1	Q6PIU2	408 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	C3P1	Q6ZMU1	363 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	TMPRSS11F	Q6ZWK6	438 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	LDB1	Q86U70	411 aa	Predicted RBP	4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	SLC26A11	Q86WA9	606 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	PAQR7	Q86WK9	346 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ANGPTL5	Q86XS5	388 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ARHGAP12	Q8IWW6	846 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	UBQLNL	Q8IYU4	475 aa		4.16	□□□□□ -1.74
CCDC66-222	ENST00000494672	ZNF34	Q8IZ26	560 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms