RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 EBF4Q9BQW3 602 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 LAT2Q9GZY6 243 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 CHRNA10Q9GZZ6 450 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 NEUROG2Q9H2A3 272 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ZDHHC6Q9H6R6 413 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 WFDC1Q9HC57 220 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 DNAJC4Q9NNZ3 241 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 CD320Q9NPF0 282 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 TRIM36Q9NQ86 728 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 BIN3Q9NQY0 253 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 RLIMQ9NVW2 624 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 DNAJB12Q9NXW2 375 aaKnown RBP3.85□□□□□ -1.79
BRCA1-220ENST00000492859 IMPACTQ9P2X3 320 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF391Q9UJN7 358 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 KCNIP3Q9Y2W7 256 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 SLC6A5Q9Y345 797 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 X6R8D5 127 aa3.85□□□□□ -1.79
BRCA1-220ENST00000492859 FER1L4A9Z1Z3 1794 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 A0A1B0GUS0 222 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SMIM31A0A1B0GVY4 71 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 PSMB11A5LHX3 300 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 LRRC3CA6NJW4 275 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 G3V2T6 193 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MS4A18H0YCH9 400 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 H3BQF6 201 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SULT1C2O00338 296 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 XPNPEP2O43895 674 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 NUAK1O60285 661 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 RAD1O60671 282 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 PPP1R11O60927 126 aaPredicted RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 DCTN3O75935 186 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SCGNO76038 276 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MED26O95402 600 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 NFATC1O95644 943 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ATP1A1P05023 1023 aaKnown RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 H2AFB1P0C5Y9 115 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF806P0C7X5 589 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ADH5P11766 374 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MUC1P15941 1255 aaPredicted RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF25P17030 456 aaPredicted RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TAL1P17542 331 aaPredicted RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SPI1P17947 270 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 LHCGRP22888 699 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 PROZP22891 400 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 PRPH2P23942 346 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MPZP25189 248 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 GNRHRP30968 328 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 CSKP41240 450 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 CDX1P47902 265 aaPredicted RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 PRLHRP49683 370 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MTHFSP49914 203 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ASCL1P50553 236 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 RRADP55042 308 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ERVPABLB-1P60509 514 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 CXADRP78310 365 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 PRPSAP1Q14558 356 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 POU2AF1Q16633 256 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TBR1Q16650 682 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 CYP51A1Q16850 503 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 DGUOKQ16854 277 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SFT2D3Q587I9 215 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SIRPB2Q5JXA9 342 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TSTD2Q5T7W7 516 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 PRAMEF17Q5VTA0 474 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SDHAF4Q5VUM1 108 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 FAM90A2PQ658T7 463 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MED27Q6P2C8 311 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 FAHD1Q6P587 224 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 KYAT3Q6YP21 454 aaKnown RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 DCDC5Q6ZRR9 648 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 RNF144BQ7Z419 303 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 GRINAQ7Z429 371 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 IGFN1Q86VF2 1251 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF761Q86XN6 746 aaPredicted RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MTURNQ8N3F0 131 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF808Q8N4W9 903 aaPredicted RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 FAM98AQ8NCA5 519 aaKnown RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 WDR20Q8TBZ3 569 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 C2CD4CQ8TF44 421 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM171Q8WVE6 324 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 CLEC4DQ8WXI8 215 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ZBTB8AQ96BR9 441 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TLCD1Q96CP7 247 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 IL4I1Q96RQ9 567 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SERPINI1Q99574 410 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MICU1Q9BPX6 476 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM208Q9BTX3 173 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MED18Q9BUE0 208 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TMPRSS13Q9BYE2 586 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SYT4Q9H2B2 425 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ARV1Q9H2C2 271 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 TBC1D17Q9HA65 648 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ZFP64Q9NPA5 681 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 INPP5EQ9NRR6 644 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.84□□□□□ -1.8
BRCA1-220ENST00000492859 C2orf42Q9NWW7 574 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 ING3Q9NXR8 418 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 MARCH2Q9P0N8 246 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 NLKQ9UBE8 527 aa3.84□□□□□ -1.8
BRCA1-220ENST00000492859 SEC14L4Q9UDX3 406 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms