RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 DNAJA3Q96EY1 480 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ZNF559Q9BR84 538 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TRIM2Q9C040 744 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ARL8BQ9NVJ2 186 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CLEC4AQ9UMR7 237 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 EMC9Q9Y3B6 208 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CACNA1CQ13936 2221 aa14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SPTAN1Q13813 2472 aaKnown RBP14.55□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 MED12LQ86YW9 2145 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 A0A1B0GWA3 101 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ZC3H12DA2A288 527 aaKnown RBP14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 M0R3H8 397 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SMNDC1O75940 238 aaKnown RBP eCLIP14.54□□□□□ -0.084e-11■■□□□ 11.9
MSH5-SAPCD1-206ENST00000491552 IFNA14P01570 189 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 FESP07332 822 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 IGFBP2P18065 325 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 CRYBA2P53672 197 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 LRRC23Q53EV4 343 aaPredicted RBP14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 MEX3BQ6ZN04 569 aaKnown RBP14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 BTLAQ7Z6A9 289 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 LUZP2Q86TE4 346 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 LSRQ86X29 649 aaPredicted RBP14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ABHD3Q8WU67 409 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SPOCK3Q9BQ16 436 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 WFDC6Q9BQY6 131 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ENKD1Q9H0I2 346 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ALG2Q9H553 416 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 C12orf10Q9HB07 376 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TMEM27Q9HBJ8 222 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TMEM181Q9P2C4 612 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GMPR2Q9P2T1 348 aaKnown RBP14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ABCD2Q9UBJ2 740 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 FOXD3Q9UJU5 478 aaPredicted RBP14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 HCFC1P51610 2035 aa14.54□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SPTBN1Q01082 2364 aaKnown RBP14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ELOA3DA6NLF2 546 aaPredicted RBP14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 A8MVM7 634 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TMEM229AB2RXF0 380 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 MSTNO14793 375 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SMAD9O15198 467 aaKnown RBP14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 HNRNPRO43390 633 aaKnown RBP14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 DNPH1O43598 174 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PRKD3O94806 890 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 AGTR1P30556 359 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 UQCRC1P31930 480 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 KDELR2P33947 212 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 IDUAP35475 653 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GSK3BP49841 420 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 OR2B6P58173 313 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 BNIP2Q12982 314 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 OR1Q1Q15612 314 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ELOA3BQ3SY89 546 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 C6orf89Q6UWU4 347 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 FITM2Q8N6M3 262 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 ELOA3Q8NG57 546 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 OR6K3Q8NGY3 331 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 VANGL1Q8TAA9 524 aaPredicted RBP14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 DNAJA4Q8WW22 397 aaPredicted RBP14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 MCHR1Q99705 422 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PRR14Q9BWN1 585 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 RBM24Q9BX46 236 aaKnown RBP14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 POTEKPQ9BYX7 375 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 GP6Q9HCN6 339 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SPAG4Q9NPE6 437 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 SELENONQ9NZV5 590 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 KLHL9Q9P2J3 617 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 PROCRQ9UNN8 238 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 TRAPPC4Q9Y296 219 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 HECTD1Q9ULT8 2610 aa14.53□□□□□ -0.08
MSH5-SAPCD1-206ENST00000491552 A8MXE2 369 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 GSTA4O15217 222 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TPST2O60704 377 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CYTIPO60759 359 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 FMO6PO60774 539 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CGAP01215 116 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CD8BP10966 210 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PNMTP11086 282 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 IMPDH2P12268 514 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 KLK2P20151 261 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC35A1P78382 337 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 KRT72Q14CN4 511 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 NPTX1Q15818 432 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ALG10BQ5I7T1 473 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ABLIM2Q6H8Q1 611 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ULK3Q6PHR2 472 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 DMRTC2Q8IXT2 367 aaPredicted RBP14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 OR6T1Q8NGN1 323 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 STK35Q8TDR2 534 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PROX1Q92786 737 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 MARVELD3Q96A59 401 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 KCTD14Q9BQ13 255 aaPredicted RBP14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TACO1Q9BSH4 297 aaKnown RBP14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 OPN3Q9H1Y3 402 aaPredicted RBP14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 KLHL13Q9P2N7 655 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 BAG5Q9UL15 447 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC9A8Q9Y2E8 581 aa14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 UTP20O75691 2785 aaKnown RBP14.52□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 A0A0B4J2E0 115 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 A0A1B0GX12 115 aa14.51□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CXCR6O00574 342 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms