RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ITCHQ96J02 903 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 OR52B2Q96RD2 323 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 BDH2Q9BUT1 245 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 CACYBPQ9HB71 228 aaKnown RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 SLC6A13Q9NSD5 602 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 CALML5Q9NZT1 146 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 TMEM181Q9P2C4 612 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 OSGIN1Q9UJX0 560 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 LAMP3Q9UQV4 416 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 TMED7Q9Y3B3 224 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 DSPPQ9NZW4 1301 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 TMEM72A0PK05 275 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 FAM234BA2RU67 622 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 CDHR4A6H8M9 788 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 TMEM247A6NEH6 219 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 TRIM64A6NGJ6 449 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 TRIM64BA6NI03 449 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 CCT8L1PA6NM43 557 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 FAAHO00519 579 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 SMAD7O15105 426 aaKnown RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 ZNF208O43345 1280 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 EIF1BO60739 113 aaKnown RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 MRPL33O75394 65 aaKnown RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 PAX1P15863 534 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 HOXB4P17483 251 aaPredicted RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 COX5AP20674 150 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 MAP2K6P52564 334 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 MVDP53602 400 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 CRISP3P54108 245 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 ATP5J2P56134 94 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 DSTNP60981 165 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 STX1BP61266 288 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 RPS4XP62701 263 aaKnown RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 SLC35A1P78382 337 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 TAGLNQ01995 201 aaKnown RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 LTBQ06643 244 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 BSPH1Q075Z2 132 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 MAPK11Q15759 364 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 KRTAP21-3Q3LHN1 58 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 GTDC1Q4AE62 458 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 TIMM23BQ5SRD1 257 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 FBXW9Q5XUX1 488 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 ADAM5Q6NVV9 412 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 SEZ6L2Q6UXD5 910 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 ZNF836Q6ZNA1 936 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 SSX8Q7RTT4 187 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 P2RY8Q86VZ1 359 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 VRK2Q86Y07 508 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 CCDC103Q8IW40 242 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 CIARTQ8N365 385 aaPredicted RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 ZNF433Q8N7K0 673 aaPredicted RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 KBTBD8Q8NFY9 601 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 OR9I1Q8NGQ6 314 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 OR52P1PQ8NH57 321 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 LILRB1Q8NHL6 650 aaPredicted RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 FBXW5Q969U6 566 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 VPS33AQ96AX1 596 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 AURKBQ96GD4 344 aaPredicted RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 NAA11Q9BSU3 229 aaPredicted RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 TPT1P8Q9HAU6 139 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 ZNF701Q9NV72 531 aaPredicted RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 RLIMQ9NVW2 624 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 THUMPD1Q9NXG2 353 aaKnown RBP7.3□□□□□ -1.24
LSM2-213ENST00000491421 TRAPPC4Q9Y296 219 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 USH1CQ9Y6N9 552 aa7.3□□□□□ -1.24
LSM2-213ENST00000491421 NAV3Q8IVL0 2385 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 A0A1W2PP18 115 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 CIB4A0PJX0 185 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 ZC3H12DA2A288 527 aaKnown RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 DPRXA6NFQ7 191 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 OR5H1A6NKK0 313 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 POLR3GO15318 223 aaPredicted RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 RAMP1O60894 148 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 RAD51DO75771 328 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 PGM3O95394 542 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 GPIP06744 558 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 HEXAP06865 529 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 TFPTP0C1Z6 253 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 GKN3PP0CG01 181 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 IMPDH2P12268 514 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 CXCR1P25024 350 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 IDUAP35475 653 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 SLC16A1P53985 500 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 COPZ1P61923 177 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 H3F3AP84243 136 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 LARS2Q15031 903 aaKnown RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 ZNF672Q499Z4 452 aaPredicted RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 RPS26P11Q5JNZ5 115 aaPredicted RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 AGBL2Q5U5Z8 902 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 RNF220Q5VTB9 566 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 SLC2A7Q6PXP3 512 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 EPGNQ6UW88 154 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 CASP12Q6UXS9 341 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 LSRQ86X29 649 aaPredicted RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 CADM2Q8N3J6 435 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 LRRC8CQ8TDW0 803 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 SMAP2Q8WU79 429 aaPredicted RBP7.29□□□□□ -1.24
LSM2-213ENST00000491421 SLC38A5Q8WUX1 472 aa7.29□□□□□ -1.24
LSM2-213ENST00000491421 NEUROG1Q92886 237 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms