RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ARL5BQ96KC2 179 aa15.49■□□□□ 0.07
SEC13-218ENST00000490283 CCL19Q99731 98 aa15.49■□□□□ 0.07
SEC13-218ENST00000490283 SPATA9Q9BWV2 254 aa15.49■□□□□ 0.07
SEC13-218ENST00000490283 NOSIPQ9Y314 301 aaKnown RBP15.49■□□□□ 0.07
SEC13-218ENST00000490283 HEATR5AQ86XA9 2040 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 IGKV3D-15A0A087WSY6 115 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 TMEM72A0PK05 275 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 EVPLLA8MZ36 301 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 CNOT4O95628 575 aaKnown RBP15.48■□□□□ 0.07
SEC13-218ENST00000490283 GKN3PP0CG01 181 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 CAPRIN1Q14444 709 aaKnown RBP15.48■□□□□ 0.07
SEC13-218ENST00000490283 MAPK11Q15759 364 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 LRIF1Q5T3J3 769 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 GCNT6Q5T4J0 391 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 C22orf34Q6ZV56 151 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 BHLHA15Q7RTS1 189 aaPredicted RBP15.48■□□□□ 0.07
SEC13-218ENST00000490283 FUNDC1Q8IVP5 155 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 UBE2J2Q8N2K1 259 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 PLPPR2Q96GM1 343 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 HS3ST6Q96QI5 342 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 SIKE1Q9BRV8 207 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 POTEKPQ9BYX7 375 aa15.48■□□□□ 0.07
SEC13-218ENST00000490283 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.48■□□□□ 0.07
SEC13-218ENST00000490283 ING1Q9UK53 422 aaPredicted RBP15.48■□□□□ 0.07
SEC13-218ENST00000490283 SMPD2O60906 423 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 BMP2P12643 396 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 KLK2P20151 261 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 IDUAP35475 653 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 ZNF704Q6ZNC4 412 aaPredicted RBP15.47■□□□□ 0.07
SEC13-218ENST00000490283 SSX8Q7RTT4 187 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 KRT73Q86Y46 540 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 MAL2Q969L2 176 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 APH1AQ96BI3 265 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 THOC1Q96FV9 657 aaKnown RBP15.47■□□□□ 0.07
SEC13-218ENST00000490283 SPATA5L1Q9BVQ7 753 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 TAPBPLQ9BX59 468 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 ADAM19Q9H013 955 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 ESRP2Q9H6T0 727 aaKnown RBP15.47■□□□□ 0.07
SEC13-218ENST00000490283 BCL2L10Q9HD36 194 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 NPHS2Q9NP85 383 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 PRSS50Q9UI38 385 aa15.47■□□□□ 0.07
SEC13-218ENST00000490283 A0A1W2PP18 115 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 ZNF814B7Z6K7 855 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 ARHGEF9O43307 516 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 KLF4O43474 513 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 MRPL33O75394 65 aaKnown RBP15.46■□□□□ 0.07
SEC13-218ENST00000490283 LYZL6O75951 148 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 GPIP06744 558 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 NUDT7P0C024 238 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 ETS2P15036 469 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 SLC16A1P53985 500 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 TSC22D1Q15714 1073 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 STK11Q15831 433 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 PAGE3Q5JUK9 113 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 P3H2Q8IVL5 708 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 CLIP4Q8N3C7 705 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 SLC35B4Q969S0 331 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 MUCL1Q96DR8 90 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 PIP5K1AQ99755 562 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 PARPBPQ9NWS1 579 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 SLC25A37Q9NYZ2 338 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 RPS6KB2Q9UBS0 482 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 LEF1Q9UJU2 399 aaPredicted RBP15.46■□□□□ 0.07
SEC13-218ENST00000490283 DCTN4Q9UJW0 460 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 SLC9A8Q9Y2E8 581 aa15.46■□□□□ 0.07
SEC13-218ENST00000490283 TEP1Q99973 2627 aaKnown RBP15.46■□□□□ 0.06
SEC13-218ENST00000490283 ZNF716A6NP11 495 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 A8MVM7 634 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 ANGPT2O15123 496 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 EDF1O60869 148 aaKnown RBP15.45■□□□□ 0.06
SEC13-218ENST00000490283 PGM3O95394 542 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 HOXB9P17482 250 aaPredicted RBP15.45■□□□□ 0.06
SEC13-218ENST00000490283 ACAA2P42765 397 aaKnown RBP15.45■□□□□ 0.06
SEC13-218ENST00000490283 NKX6-1P78426 367 aaPredicted RBP15.45■□□□□ 0.06
SEC13-218ENST00000490283 CDK6Q00534 326 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 TAB1Q15750 504 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 SHEQ5VZ18 495 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 FBXW9Q5XUX1 488 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 REEP3Q6NUK4 255 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 PAQR6Q6TCH4 344 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 CASP12Q6UXS9 341 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.45■□□□□ 0.06
SEC13-218ENST00000490283 CCDC103Q8IW40 242 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 NFKBIDQ8NI38 313 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 TMUB1Q9BVT8 246 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 VAPAQ9P0L0 249 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 SLC13A4Q9UKG4 626 aa15.45■□□□□ 0.06
SEC13-218ENST00000490283 HIVEP1P15822 2718 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 A0A0G2JND7 137 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 CIB4A0PJX0 185 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 ZC3H12DA2A288 527 aaKnown RBP15.44■□□□□ 0.06
SEC13-218ENST00000490283 CD3EP07766 207 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 ARAFP10398 606 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 IMPDH2P12268 514 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 GGT1P19440 569 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 SLC6A2P23975 617 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 LOXP28300 417 aaPredicted RBP15.44■□□□□ 0.06
SEC13-218ENST00000490283 PRKAR1BP31321 381 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 RIPPLY3P57055 190 aa15.44■□□□□ 0.06
SEC13-218ENST00000490283 NCALDP61601 193 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms