RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PRKCDQ05655 676 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 SNCBQ16143 134 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 PLEKHN1Q494U1 663 aaPredicted RBP12.06□□□□□ -0.48
TRAIP-210ENST00000489948 SYT14P1Q58G82 188 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 RNFT1Q5M7Z0 435 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 C1orf94Q6P1W5 598 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 PGBD2Q6P3X8 592 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 NRMQ8IXM6 262 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 HS3ST5Q8IZT8 346 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 EXD3Q8N9H8 876 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 Q8NA96 180 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 OR9Q2Q8NGE9 314 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 LIPHQ8WWY8 451 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 DDIT4LQ96D03 193 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 SFXN2Q96NB2 322 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 TAAR6Q96RI8 345 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 BARD1Q99728 777 aaKnown RBP12.06□□□□□ -0.48
TRAIP-210ENST00000489948 RBM4BQ9BQ04 359 aaKnown RBP12.06□□□□□ -0.48
TRAIP-210ENST00000489948 RBM4Q9BWF3 364 aaKnown RBP12.06□□□□□ -0.48
TRAIP-210ENST00000489948 POTEKPQ9BYX7 375 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 SLC25A18Q9H1K4 315 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 VCX3BQ9H321 246 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 PDP1Q9P0J1 537 aaPredicted RBP12.06□□□□□ -0.48
TRAIP-210ENST00000489948 HDGFL3Q9Y3E1 203 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 AP4B1Q9Y6B7 739 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 KIAA1549Q9HCM3 1950 aa12.06□□□□□ -0.48
TRAIP-210ENST00000489948 ZNF407Q9C0G0 2248 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 A0A1B0GVC2 190 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 GJE1A6NN92 205 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 SHISA8B8ZZ34 492 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 EI24O14681 340 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 EFNA2O43921 213 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 OR10H3O60404 316 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 TRAPPC6AO75865 159 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 ACTL6AO96019 429 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 ALPLP05186 524 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 CELA3AP09093 270 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 PTDSS1P48651 473 aaKnown RBP12.05□□□□□ -0.48
TRAIP-210ENST00000489948 ALDH3A2P51648 485 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 PPP1R8Q12972 351 aaKnown RBP12.05□□□□□ -0.48
TRAIP-210ENST00000489948 DAG1Q14118 895 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 SLC10A1Q14973 349 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 LAPTM4AQ15012 233 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 TOMM20Q15388 145 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 NADK2Q4G0N4 442 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 CMPK2Q5EBM0 449 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 WIPI1Q5MNZ9 446 aaPredicted RBP12.05□□□□□ -0.48
TRAIP-210ENST00000489948 FAM69AQ5T7M9 428 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 KDM4DQ6B0I6 523 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 PPP4R4Q6NUP7 873 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 CD300LDQ6UXZ3 194 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 TMPRSS11FQ6ZWK6 438 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 RRM2BQ7LG56 351 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 YRDCQ86U90 279 aaKnown RBP12.05□□□□□ -0.48
TRAIP-210ENST00000489948 STK32CQ86UX6 486 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 PARP8Q8N3A8 854 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 AQP11Q8NBQ7 271 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 PFN4Q8NHR9 129 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 NEIL3Q8TAT5 605 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 RNF217Q8TC41 542 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 NRG4Q8WWG1 115 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 SLC39A7Q92504 469 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 RDH12Q96NR8 316 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 UBL7Q96S82 380 aaPredicted RBP12.05□□□□□ -0.48
TRAIP-210ENST00000489948 FEVQ99581 238 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 PTDSS2Q9BVG9 487 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
TRAIP-210ENST00000489948 ZNF71Q9NQZ8 489 aaPredicted RBP12.05□□□□□ -0.48
TRAIP-210ENST00000489948 RPH3AQ9Y2J0 694 aaPredicted RBP12.05□□□□□ -0.48
TRAIP-210ENST00000489948 KALRNO60229 2985 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 ZC3H12DA2A288 527 aaKnown RBP12.04□□□□□ -0.48
TRAIP-210ENST00000489948 ENO4A6NNW6 628 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 FTCDNL1E5RQL4 147 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 H0YJX3 145 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 SOCS2O14508 198 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 DNPH1O43598 174 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 OR2T1O43869 369 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 PIP5K1CO60331 668 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 AHSA1O95433 338 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 MT-ATP6P00846 226 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 ZNF26P17031 533 aaPredicted RBP12.04□□□□□ -0.48
TRAIP-210ENST00000489948 IL11P20809 199 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 GSSP48637 474 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 SLC9A3P48764 834 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 LSM11P83369 360 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAIP-210ENST00000489948 FOXK1P85037 733 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 ALDH6A1Q02252 535 aaKnown RBP12.04□□□□□ -0.48
TRAIP-210ENST00000489948 CRYZQ08257 329 aaKnown RBP12.04□□□□□ -0.48
TRAIP-210ENST00000489948 COX10Q12887 443 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 KLRB1Q12918 225 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 TSPAN31Q12999 210 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 MFSD13AQ14CX5 517 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 BCL2A1Q16548 175 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 ZNF74Q16587 644 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 RFX4Q33E94 735 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 C1orf140Q5VVS0 124 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 LPCAT4Q643R3 524 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 POMZP3Q6PJE2 187 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 C19orf48Q6RUI8 117 aa12.04□□□□□ -0.48
TRAIP-210ENST00000489948 TBPL2Q6SJ96 375 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms