RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 HK1P19367 917 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 TCEA1P23193 301 aaKnown RBP18.9■□□□□ 0.62
SND1-214ENST00000489417 ADH6P28332 368 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 SLC9A3P48764 834 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 IL5RAQ01344 420 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 ZNF74Q16587 644 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 BROXQ5VW32 411 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 SLX4IPQ5VYV7 408 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 TMEM236Q5W0B7 351 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 SLC25A25Q6KCM7 469 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 C5orf46Q6UWT4 87 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 CCDC71Q8IV32 467 aaPredicted RBP18.9■□□□□ 0.62
SND1-214ENST00000489417 C10orf53Q8N6V4 93 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 OR2M7Q8NG81 312 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 OR8D4Q8NGM9 314 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 FAM81AQ8TBF8 368 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 KTI12Q96EK9 354 aaPredicted RBP18.9■□□□□ 0.62
SND1-214ENST00000489417 C5orf34Q96MH7 638 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 HES7Q9BYE0 225 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 SLC25A19Q9HC21 320 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 ZFP64Q9NPA5 681 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 SERINC1Q9NRX5 453 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 PNPLA3Q9NST1 481 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 TBC1D23Q9NUY8 699 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 IL20Q9NYY1 176 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 KLF13Q9Y2Y9 288 aaPredicted RBP18.9■□□□□ 0.62
SND1-214ENST00000489417 HSPE1-MOB4S4R3N1 261 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 MED13Q9UHV7 2174 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 ZC3H12DA2A288 527 aaKnown RBP18.89■□□□□ 0.61
SND1-214ENST00000489417 PINLYPA6NC86 204 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 LRRN3E7EW58 273 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 ZNF208O43345 1280 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 NME2P1O60361 137 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 NPIPB7O75200 414 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 RCBTB2O95199 551 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 CD46P15529 392 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 NME2P22392 152 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 SRD5A2P31213 254 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 MAP2K6P52564 334 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 CDK5Q00535 292 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 GINS1Q14691 196 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 C12orf73Q69YU5 71 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 RPL13AP3Q6NVV1 102 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 IGFL2Q6UWQ7 119 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 OAFQ86UD1 273 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 LIPHQ8WWY8 451 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 TAAR8Q969N4 342 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 SAMD8Q96LT4 415 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 TSSK6Q9BXA6 273 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.89■□□□□ 0.61
SND1-214ENST00000489417 OR52D1Q9H346 318 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 KLHL1Q9NR64 748 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 SIGLEC7Q9Y286 467 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 ZNF337Q9Y3M9 751 aa18.89■□□□□ 0.61
SND1-214ENST00000489417 PCNX3Q9H6A9 2034 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 EML6Q6ZMW3 1958 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 TRAV27A0A087WT01 109 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 RRP8O43159 456 aaKnown RBP18.88■□□□□ 0.61
SND1-214ENST00000489417 PTP4A3O75365 173 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 AHSA1O95433 338 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 BGLAPP02818 100 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 GIPRP48546 466 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 CHN2P52757 468 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 SMSP52788 366 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 CDC42P60953 191 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 ISL1P61371 349 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 CD47Q08722 323 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 FOXO1Q12778 655 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 ZBED5Q49AG3 693 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 C1orf140Q5VVS0 124 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 SULF2Q8IWU5 870 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 DEPDC4Q8N2C3 294 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 GTPBP8Q8N3Z3 284 aaPredicted RBP18.88■□□□□ 0.61
SND1-214ENST00000489417 IQCF1Q8N6M8 205 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 OR5M1Q8NGP8 315 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 OR51A7Q8NH64 312 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 GATA6Q92908 595 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 DTNBP1Q96EV8 351 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 OR11A1Q9GZK7 315 aa18.88■□□□□ 0.61
SND1-214ENST00000489417 SPIN1Q9Y657 262 aaPredicted RBP18.88■□□□□ 0.61
SND1-214ENST00000489417 EFNA2O43921 213 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 ZIC3O60481 467 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 RPS5P46782 204 aaKnown RBP18.87■□□□□ 0.61
SND1-214ENST00000489417 FXYD6P3P58550 94 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 FOXK1P85037 733 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 MYBPC1Q00872 1141 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 LTBQ06643 244 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 TMEM44Q2T9K0 475 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.87■□□□□ 0.616e-6■□□□□ 8.6
SND1-214ENST00000489417 GLYR1Q49A26 553 aaPredicted RBP18.87■□□□□ 0.61
SND1-214ENST00000489417 C1QL3Q5VWW1 255 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 SLC27A4Q6P1M0 643 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 SMARCD3Q6STE5 483 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 LRRC17Q8N6Y2 441 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 OR52L1Q8NGH7 329 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 OR6S1Q8NH40 331 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 DDIT4LQ96D03 193 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 SCMH1Q96GD3 660 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 DCBLD2Q96PD2 775 aa18.87■□□□□ 0.61
SND1-214ENST00000489417 MOGAT1Q96PD6 335 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms