RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PDE10AQ9Y233 779 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 LRCH1Q9Y2L9 728 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 GPR45Q9Y5Y3 372 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 SOX21Q9Y651 276 aaPredicted RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 ATP23Q9Y6H3 246 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 FAT2Q9NYQ8 4349 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 HMCN2Q8NDA2 5059 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 MDFIC2A0A1B0GVS7 189 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 H7BY64 318 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 MANBAO00462 879 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 FBP2O00757 339 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 CLGNO14967 610 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 LSM1O15116 133 aaKnown RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 DYRK3O43781 588 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 ANGPTL7O43827 346 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 UGDHO60701 494 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 DNAJA2O60884 412 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 SEC22BO75396 215 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 EEDO75530 441 aaKnown RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 PLGP00747 810 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 ALOX12P18054 663 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 TCN1P20061 433 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 CASP2P42575 452 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 GPR6P46095 362 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 HSPA13P48723 471 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 ERFP50548 548 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC7A2P52569 658 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 CLNS1AP54105 237 aaKnown RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 EEFSECP57772 596 aaKnown RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 FBXW4P57775 412 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 RPL38P63173 70 aaKnown RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 MRPS22P82650 360 aaKnown RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 CEACAM7Q14002 265 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 HERPUD1Q15011 391 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 MLC1Q15049 377 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 C18orf21Q32NC0 220 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 GRAMD1BQ3KR37 738 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 VPS26BQ4G0F5 336 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 GGTA1PQ4G0N0 100 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 SGO1Q5FBB7 561 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 TIMM23BQ5SRD1 257 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 IL23RQ5VWK5 629 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 FAM205BPQ63HN1 556 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 CYP20A1Q6UW02 462 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 DHFR2Q86XF0 187 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 PQLC1Q8N2U9 271 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 GLB1L3Q8NCI6 653 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 OR9I1Q8NGQ6 314 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 FBXO30Q8TB52 745 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC13A3Q8WWT9 602 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 SELENOMQ8WWX9 145 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 SMPDL3AQ92484 453 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 KTI12Q96EK9 354 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 PRAP1Q96NZ9 151 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 ASCL2Q99929 193 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 TMEM79Q9BSE2 394 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 C1orf50Q9BV19 199 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 DPY30Q9C005 99 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 MS4A7Q9GZW8 240 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 PRDM13Q9H4Q3 707 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 CLK4Q9HAZ1 481 aaKnown RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 C1orf109Q9NX04 203 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 GIMAP2Q9UG22 337 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF225Q9UK10 706 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 AP3M1Q9Y2T2 418 aa6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 POLR3HQ9Y535 204 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-206ENST00000489414 VPS13DQ5THJ4 4388 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 C1orf226A1L170 272 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 DEAF1O75398 565 aaPredicted RBP6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 PSIP1O75475 530 aaKnown RBP6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 CBR3O75828 277 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 RSL1D1O76021 490 aaKnown RBP6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 KCNH1O95259 989 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 ADAP00813 363 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 GBAP04062 536 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 IL6P05231 212 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC35G6P0C7Q6 338 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 PRPS2P11908 318 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 HSD17B1P14061 328 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF17P17021 662 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 HNF4AP41235 474 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 GDF5P43026 501 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC6A8P48029 635 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 NEK2P51955 445 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 HSD17B7P56937 341 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 UFM1P61960 85 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 PHEXP78562 749 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 ABATP80404 500 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 IL1RL1Q01638 556 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 IRF8Q02556 426 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 CSTF3Q12996 717 aaKnown RBP6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 CPSF6Q16630 551 aaKnown RBP eCLIP6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 TIGD2Q4W5G0 525 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 DEPDC1Q5TB30 811 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 GPR157Q5UAW9 335 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 LIPJQ5W064 366 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 IZUMO2Q6UXV1 221 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 TFAP2EQ6VUC0 442 aa6.41□□□□□ -1.38
EXOSC3-206ENST00000489414 MBOAT1Q6ZNC8 495 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms