RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TGIF1Q15583 401 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 ISXQ2M1V0 245 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 PAN3Q58A45 887 aaKnown RBP3.27□□□□□ -1.89
XRN1-213ENST00000489241 CARD16Q5EG05 197 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 RNASEKQ6P5S7 137 aaKnown RBP3.27□□□□□ -1.89
XRN1-213ENST00000489241 P2RY8Q86VZ1 359 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 C17orf82Q86X59 251 aaPredicted RBP3.27□□□□□ -1.89
XRN1-213ENST00000489241 CCDC65Q8IXS2 484 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 HAVCR1Q96D42 359 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 OR5M11Q96RB7 305 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 APOL2Q9BQE5 337 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 RNF126Q9BV68 326 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 FAM192AQ9GZU8 254 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 NHEJ1Q9H9Q4 299 aaPredicted RBP3.27□□□□□ -1.89
XRN1-213ENST00000489241 NMRAL1Q9HBL8 299 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 OR1A1Q9P1Q5 309 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 CAB39Q9Y376 341 aaPredicted RBP3.27□□□□□ -1.89
XRN1-213ENST00000489241 CSDC2Q9Y534 153 aaKnown RBP3.27□□□□□ -1.89
XRN1-213ENST00000489241 PCNX3Q9H6A9 2034 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 A0A087WWV3 80 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 TCRBV9S1A1TA0A576 114 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 OR2AG2A6NM03 316 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 GFYI3L273 518 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 HSD17B6O14756 317 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 CACNG3O60359 315 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 ZNF354AO60765 605 aaPredicted RBP3.26□□□□□ -1.89
XRN1-213ENST00000489241 AGTP01019 485 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 HOXD10P28358 340 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 HNRNPH3P31942 346 aaKnown RBP3.26□□□□□ -1.89
XRN1-213ENST00000489241 GCKP35557 465 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 OPRD1P41143 372 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 CRYBB2P43320 205 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 KIR2DS2P43631 304 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 GYG1P46976 350 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 PLP1P60201 277 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 RPS8P62241 208 aaKnown RBP3.26□□□□□ -1.89
XRN1-213ENST00000489241 ZNF77Q15935 545 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 DUSP7Q16829 419 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 TIMM50Q3ZCQ8 353 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 TCTEX1D4Q5JR98 221 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 OR2G6Q5TZ20 316 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 CARD17Q5XLA6 110 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 LRRC66Q68CR7 880 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 OR5M10Q6IEU7 315 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 C2orf66Q6UXQ4 117 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 CDC20BQ86Y33 519 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 HPS6Q86YV9 775 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 AGAP11Q8TF27 550 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 HTR3CQ8WXA8 447 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 RAPGEF5Q92565 580 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 CXorf40BQ96DE9 158 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 TM4SF19Q96DZ7 209 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 C1orf147Q96MC9 270 aaPredicted RBP3.26□□□□□ -1.89
XRN1-213ENST00000489241 FOXN4Q96NZ1 517 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 SRXN1Q9BYN0 137 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 PPA2Q9H2U2 334 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 NCOR1P1Q9H4R4 102 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 REEP4Q9H6H4 257 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 NARFLQ9H6Q4 476 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 NT5MQ9NPB1 228 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 KLHL28Q9NXS3 571 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 BFARQ9NZS9 450 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 ABCG2Q9UNQ0 655 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 PLLPQ9Y342 182 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 PEX16Q9Y5Y5 336 aa3.26□□□□□ -1.89
XRN1-213ENST00000489241 GON4LQ3T8J9 2241 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 TTC21BQ7Z4L5 1316 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 A0A075B6Q4 140 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 IQANK1A0A1B0GTG1 560 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 SERTM2A0A1B0GWG4 89 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 DHRS7CA6NNS2 312 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 A8MXQ7 604 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 RNF13O43567 381 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 WBP4O75554 376 aaKnown RBP3.25□□□□□ -1.89
XRN1-213ENST00000489241 SLITRK3O94933 977 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 LALBAP00709 142 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 ASGR1P07306 291 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 FGF4P08620 206 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 STSP08842 583 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 IGLL1P15814 213 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 NPR2P20594 1047 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 VDAC1P21796 283 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 GATA2P23769 480 aaPredicted RBP3.25□□□□□ -1.89
XRN1-213ENST00000489241 DDOSTP39656 456 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 SLC25A1P53007 311 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 CD47Q08722 323 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 SLC10A7Q0GE19 358 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 PPIL2Q13356 520 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 EIPR1Q53HC9 387 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 XKR7Q5GH72 579 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 GPRC6AQ5T6X5 926 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 TMEM107Q6UX40 140 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 CXCL17Q6UXB2 119 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 UTS2BQ765I0 119 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 SPATA4Q8NEY3 305 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 ZPLD1Q8TCW7 415 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 DNAJA4Q8WW22 397 aaPredicted RBP3.25□□□□□ -1.89
XRN1-213ENST00000489241 GTSF1Q8WW33 167 aa3.25□□□□□ -1.89
XRN1-213ENST00000489241 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.25□□□□□ -1.89
XRN1-213ENST00000489241 NUS1Q96E22 293 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms