RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 A0A1W2PRS3 328 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 TMEM72A0PK05 275 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 OR5H15A6NDH6 313 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 KIR3DP1A8MWS1 328 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 M0R129 80 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 ETV2O00321 342 aaPredicted RBP9.08□□□□□ -0.96
USP11-211ENST00000489111 TRIM3O75382 744 aaPredicted RBP9.08□□□□□ -0.96
USP11-211ENST00000489111 CBR3O75828 277 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 SMNDC1O75940 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
USP11-211ENST00000489111 NDUFB2O95178 105 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 WDPCPO95876 746 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 MT-ATP6P00846 226 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 TFPIP10646 304 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 HK1P19367 917 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 FUT1P19526 365 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 EEF1B2P24534 225 aaKnown RBP9.08□□□□□ -0.96
USP11-211ENST00000489111 DPP4P27487 766 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 ELK4P28324 431 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 GTF2E2P29084 291 aaKnown RBP9.08□□□□□ -0.96
USP11-211ENST00000489111 SLC6A6P31641 620 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 GIPRP48546 466 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 DNASE1L1P49184 302 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 PCYT1AP49585 367 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 CCL11P51671 97 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 MAP2K6P52564 334 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 DLX5P56178 289 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 DSCR4P56555 118 aaPredicted RBP9.08□□□□□ -0.96
USP11-211ENST00000489111 SOX8P57073 446 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 GPR85P60893 370 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 ARG2P78540 354 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 TOMM20Q15388 145 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 INPP5JQ15735 1006 aaPredicted RBP9.08□□□□□ -0.96
USP11-211ENST00000489111 ZNF74Q16587 644 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 PGGHGQ32M88 737 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 ZBED5Q49AG3 693 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 SLC25A53Q5H9E4 307 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 C6orf141Q5SZD1 244 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 C1orf140Q5VVS0 124 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 RAET1LQ5VY80 246 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 TMEM154Q6P9G4 183 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 SLC46A3Q7Z3Q1 461 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 ADGRG3Q86Y34 549 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 SNIP1Q8TAD8 396 aaKnown RBP9.08□□□□□ -0.96
USP11-211ENST00000489111 STK35Q8TDR2 534 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 FBLIM1Q8WUP2 373 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 C5orf34Q96MH7 638 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 FAM173AQ9BQD7 235 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 IFT27Q9BW83 186 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 RNF32Q9H0A6 362 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 FKRPQ9H9S5 495 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 NANSQ9NR45 359 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 CLN6Q9NWW5 311 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 SCN3BQ9NY72 215 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 IL20Q9NYY1 176 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 TVP23BQ9NYZ1 205 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 PLA2G3Q9NZ20 509 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 B4GALT7Q9UBV7 327 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 IL20RAQ9UHF4 553 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 ZNF229Q9UJW7 825 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 SIGLEC7Q9Y286 467 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 MSRB2Q9Y3D2 182 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 AHCTF1Q8WYP5 2266 aa9.08□□□□□ -0.96
USP11-211ENST00000489111 PCSK5Q92824 1860 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 RIIAD1A6NNX1 92 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 B4DXG7 233 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 SHISA8B8ZZ34 492 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 SLC1A7O00341 560 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 ZNF208O43345 1280 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 FAM20BO75063 409 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 HMGN1P05114 100 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 CD46P15529 392 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 CNR1P21554 472 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 FMO3P31513 532 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 GRK5P34947 590 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 RPL4P36578 427 aaKnown RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 RPS5P46782 204 aaKnown RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 PRPS1P60891 318 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 SNRPGP62308 76 aaKnown RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 CSNK2BP67870 215 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 CDK5Q00535 292 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 TEKQ02763 1124 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 EGR4Q05215 589 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 SELENBP1Q13228 472 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 CDK5R2Q13319 367 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 SNAPC1Q16533 368 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 ANKDD1AQ495B1 522 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 FAM69AQ5T7M9 428 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 SPINK14Q6IE38 97 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 C3orf33Q6P1S2 294 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 MAMDC2Q7Z304 686 aaPredicted RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 LSRQ86X29 649 aaPredicted RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 GTPBP8Q8N3Z3 284 aaPredicted RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 ATP6V1C2Q8NEY4 427 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 BPIFB6Q8NFQ5 453 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 TSPAN14Q8NG11 270 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 OR8J1Q8NGP2 316 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 RHOXF1Q8NHV9 184 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 SLC25A43Q8WUT9 341 aaPredicted RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 TRUB1Q8WWH5 349 aaKnown RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 TAAR8Q969N4 342 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms