RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 EVA1AQ9H8M9 152 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 RASSF1Q9NS23 344 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 GID8Q9NWU2 228 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 SELENONQ9NZV5 590 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 CAPN7Q9Y6W3 813 aa12.73□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF724A8MTY0 619 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 GPR171O14626 319 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 MRASO14807 208 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 SMAD9O15198 467 aaKnown RBP12.72□□□□□ -0.37
BRCA1-218ENST00000489037 SLC22A2O15244 555 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 CCDC22O60826 627 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 PPP3CBP16298 524 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 AQP1P29972 269 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 IDUAP35475 653 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
BRCA1-218ENST00000489037 INTS11Q5TA45 600 aaKnown RBP12.72□□□□□ -0.37
BRCA1-218ENST00000489037 DHRS4L2Q6PKH6 230 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 SERPINA11Q86U17 422 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 CDH24Q86UP0 819 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 ARMC8Q8IUR7 673 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 DNAJA3Q96EY1 480 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 ARL5BQ96KC2 179 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF317Q96PQ6 595 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-218ENST00000489037 ECSITQ9BQ95 431 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 PSD2Q9BQI7 771 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 TAPBPLQ9BX59 468 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 POTEKPQ9BYX7 375 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 NSRP1Q9H0G5 558 aaKnown RBP12.72□□□□□ -0.37
BRCA1-218ENST00000489037 BCO1Q9HAY6 547 aa12.72□□□□□ -0.37
BRCA1-218ENST00000489037 LOC100653049A0A140TA62 436 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 ELOA3DA6NLF2 546 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-218ENST00000489037 A8MVM7 634 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 FBP2O00757 339 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 KRT34O76011 436 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 GPIP06744 558 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 PRG2P13727 222 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 PDK3Q15120 406 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 ADRM1Q16186 407 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 ELOA3BQ3SY89 546 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 REP15Q6BDI9 236 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 NUFIP2Q7Z417 695 aaKnown RBP12.71□□□□□ -0.37
BRCA1-218ENST00000489037 GALNT5Q7Z7M9 940 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 PATL1Q86TB9 770 aaKnown RBP12.71□□□□□ -0.37
BRCA1-218ENST00000489037 SNX32Q86XE0 403 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 C10orf111Q8N326 155 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 ELOA3Q8NG57 546 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 OR52E4Q8NGH9 312 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 OR10A6Q8NH74 314 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 SLC26A7Q8TE54 656 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 C10orf82Q8WW14 230 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 LRRC58Q96CX6 371 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 WFIKKN1Q96NZ8 548 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 HDHD5Q9BXW7 423 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 TRIM2Q9C040 744 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 KAT8Q9H7Z6 458 aaKnown RBP12.71□□□□□ -0.37
BRCA1-218ENST00000489037 GPR52Q9Y2T5 361 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 TESMINQ9Y4I5 508 aa12.71□□□□□ -0.37
BRCA1-218ENST00000489037 DCHS2Q6V1P9 2916 aa12.71□□□□□ -0.38
BRCA1-218ENST00000489037 FAM221AA4D161 298 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 FRS3O43559 492 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 FPR1P21462 350 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-218ENST00000489037 SELPLGQ14242 412 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 ANKRD34AQ69YU3 496 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 NANOGP8Q6NSW7 305 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 TFAP2EQ6VUC0 442 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 RANBP3LQ86VV4 465 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-218ENST00000489037 CDC20BQ86Y33 519 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 PTOV1Q86YD1 416 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 STEAP2Q8NFT2 490 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 OR8J3Q8NGG0 315 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 RP9Q8TA86 221 aaKnown RBP12.7□□□□□ -0.38
BRCA1-218ENST00000489037 RNF217Q8TC41 542 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 STK35Q8TDR2 534 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 DNAJA4Q8WW22 397 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-218ENST00000489037 C3orf49Q96BT1 292 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-218ENST00000489037 ZC3HAV1LQ96H79 300 aaKnown RBP12.7□□□□□ -0.38
BRCA1-218ENST00000489037 NANOGQ9H9S0 305 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 TMEM27Q9HBJ8 222 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 TESQ9UGI8 421 aaKnown RBP12.7□□□□□ -0.38
BRCA1-218ENST00000489037 ITGB1BP2Q9UKP3 347 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 NOSIPQ9Y314 301 aaKnown RBP12.7□□□□□ -0.38
BRCA1-218ENST00000489037 CHST2Q9Y4C5 530 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 POLQO75417 2590 aa12.7□□□□□ -0.38
BRCA1-218ENST00000489037 ZC3H12DA2A288 527 aaKnown RBP12.69□□□□□ -0.38
BRCA1-218ENST00000489037 M0QX08 132 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 MFN2O95140 757 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 AHSA1O95433 338 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 PNMTP11086 282 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 IMPDH2P12268 514 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 IL32P24001 234 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 GTF2E2P29084 291 aaKnown RBP12.69□□□□□ -0.38
BRCA1-218ENST00000489037 OR3A2P47893 321 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 HOXC5Q00444 222 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 BNIP2Q12982 314 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 CEACAM7Q14002 265 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 P2RY6Q15077 328 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 OR7A5Q15622 319 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms