RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PPIBP23284 216 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 TACR3P29371 465 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 HOXC12P31275 282 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 SLC16A1P53985 500 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 OR2B6P58173 313 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 COPZ1P61923 177 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 SLC35A1P78382 337 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 GTDC1Q4AE62 458 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 PRAMEF8Q5VWM4 474 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 PRAMEF7Q5VXH5 474 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF836Q6ZNA1 936 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 P3H2Q8IVL5 708 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 SLC38A5Q8WUX1 472 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 AURKBQ96GD4 344 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 TMEM19Q96HH6 336 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 NAA11Q9BSU3 229 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 OR11A1Q9GZK7 315 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 PAIP1Q9H074 479 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 ESRP2Q9H6T0 727 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 SLCO1B3Q9NPD5 702 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 TMEM45AQ9NWC5 275 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 OSGIN1Q9UJX0 560 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 NOSIPQ9Y314 301 aaKnown RBP12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 PCDHB14Q9Y5E9 798 aa12.24□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF716A6NP11 495 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF814B7Z6K7 855 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 C5orf58C9J3I9 102 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 CLIC1O00299 241 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 CCNA2P20248 432 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 COX5AP20674 150 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 CXCR1P25024 350 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 IDH3AP50213 366 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 ATP4BP51164 291 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 AQP5P55064 265 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 RGNQ15493 299 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 TAB1Q15750 504 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 MAPK11Q15759 364 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 WBP2NLQ6ICG8 309 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 SLC2A7Q6PXP3 512 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 VRK2Q86Y07 508 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 WFDC11Q8NEX6 87 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 BBS10Q8TAM1 723 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 TMEM171Q8WVE6 324 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 SLC35B4Q969S0 331 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 APH1AQ96BI3 265 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 EBF4Q9BQW3 602 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 TMEM204Q9BSN7 226 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 SPATA9Q9BWV2 254 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 A4GALTQ9NPC4 353 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 CCDC167Q9P0B6 97 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 PRSS50Q9UI38 385 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 RNF115Q9Y4L5 304 aa12.23□□□□□ -0.45
SPTLC1-207ENST00000488921 TMEM72A0PK05 275 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 NR5A2O00482 541 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 HS3ST1O14792 307 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 LYZL6O75951 148 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 GPIP06744 558 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 BMP2P12643 396 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 IDUAP35475 653 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 GYS2P54840 703 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 H3F3AP84243 136 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 CAPRIN1Q14444 709 aaKnown RBP12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 SQLEQ14534 574 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 TSC22D1Q15714 1073 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 STK11Q15831 433 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 RPS26P11Q5JNZ5 115 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 Q5PR19 223 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 TIMM23BQ5SRD1 257 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 LRIF1Q5T3J3 769 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 FBXW9Q5XUX1 488 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 ALKBH2Q6NS38 261 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 BLOC1S3Q6QNY0 202 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 P2RY8Q86VZ1 359 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 UBE2J2Q8N2K1 259 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF611Q8N823 705 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 STON2Q8WXE9 905 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF775Q96BV0 537 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 ADAM19Q9H013 955 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 RABEP2Q9H5N1 569 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 CXorf56Q9H5V9 222 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 CCDC134Q9H6E4 229 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 BCL2L10Q9HD36 194 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 DLL4Q9NR61 685 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 RLIMQ9NVW2 624 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 CORO2BQ9UQ03 480 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 SLC9A8Q9Y2E8 581 aa12.22□□□□□ -0.45
SPTLC1-207ENST00000488921 MRPL33O75394 65 aaKnown RBP12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 CD3EP07766 207 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 GKN3PP0CG01 181 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 HOXB9P17482 250 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 GGT1P19440 569 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 GNGT1P63211 74 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 PPA1Q15181 289 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 ZNF311Q5JNZ3 666 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 NCMAPQ5T1S8 102 aa12.21□□□□□ -0.45
SPTLC1-207ENST00000488921 ADAM5Q6NVV9 412 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms