RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 SYT14Q8NB59 555 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 IL17RDQ8NFM7 739 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 OR1N1Q8NGS0 311 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 ASB15Q8WXK1 588 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 DAZLQ92904 295 aaKnown RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 TSSK6Q9BXA6 273 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 CDCA4Q9BXL8 241 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 CFL2Q9Y281 166 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 LSM2Q9Y333 95 aaKnown RBP11.14□□□□□ -0.63
HDAC6-230ENST00000488543 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 PEX16Q9Y5Y5 336 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 CFAP47Q6ZTR5 3102 aa11.14□□□□□ -0.63
HDAC6-230ENST00000488543 SPTBN2O15020 2390 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 A0A1B0GWA3 101 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 SAGE2PA6NJ88 616 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 TLX2O43763 284 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-230ENST00000488543 PTTG1O95997 202 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 SOX6P35712 828 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 STAT5AP42229 794 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 SLC15A1P46059 708 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 EFNB1P98172 346 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 ZSWIM7Q19AV6 140 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 GLRX5Q86SX6 157 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF441Q8N8Z8 693 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 FAM71CQ8NEG0 241 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 PFN4Q8NHR9 129 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 CRELD1Q96HD1 420 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 ART5Q96L15 291 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 SLC30A2Q9BRI3 323 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 NRSN2Q9GZP1 204 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 TP63Q9H3D4 680 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-230ENST00000488543 FOXJ2Q9P0K8 574 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 GPR52Q9Y2T5 361 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 ZFHX4Q86UP3 3567 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 SH3D21A4FU49 640 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 CDC42EP2O14613 210 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 OIP5O43482 229 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 CCNKO75909 580 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 EMP2P54851 167 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF79Q15937 498 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 OR2G6Q5TZ20 316 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 RRM2BQ7LG56 351 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 ANKRD37Q7Z713 158 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 LSMEM1Q8N8F7 131 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 SCAIQ8N9R8 606 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 TMEM239Q8WW34 195 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 UCN2Q96RP3 112 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 POLDIP3Q9BY77 421 aaKnown RBP11.13□□□□□ -0.63
HDAC6-230ENST00000488543 WWTR1Q9GZV5 400 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 MMP28Q9H239 520 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 TMEM27Q9HBJ8 222 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 C20orf141Q9NUB4 165 aa11.13□□□□□ -0.63
HDAC6-230ENST00000488543 C2orf92A0A1B0GVN3 265 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 CDC14CA4D256 554 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 TO15178 435 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 UTS2O95399 124 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 MAKP20794 623 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 CRYBB2P43320 205 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 ETV1P50549 477 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 DCAF7P61962 342 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 SPHARQ15513 63 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 CD226Q15762 336 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 TMEM164Q5U3C3 297 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 TUBA3EQ6PEY2 450 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 C19orf48Q6RUI8 117 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 FAM198BQ6UWH4 519 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 KIRREL2Q6UWL6 708 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 CASP12Q6UXS9 341 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 APOOLQ6UXV4 268 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF620Q6ZNG0 422 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF550Q7Z398 422 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 PRR22Q8IZ63 422 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 RNF113BQ8IZP6 322 aaKnown RBP11.12□□□□□ -0.63
HDAC6-230ENST00000488543 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-230ENST00000488543 OR9Q1Q8NGQ5 310 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 OR4Q3Q8NH05 313 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 GRHL3Q8TE85 626 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-230ENST00000488543 GAL3ST4Q96RP7 486 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 CRB3Q9BUF7 120 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF426Q9BUY5 554 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 BEX2Q9BXY8 128 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 TRIM2Q9C040 744 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 EXPH5Q8NEV8 1989 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 CHP2O43745 196 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 ALOX12BO75342 701 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 KLF7O75840 302 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-230ENST00000488543 CDRT1O95170 752 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 CSTAP01040 98 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 ADH7P40394 386 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 RFX2P48378 723 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 OR2B6P58173 313 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 C22orf42Q6IC83 251 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF517Q6ZMY9 492 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-230ENST00000488543 OR8J1Q8NGP2 316 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 TEX47Q8TBZ9 253 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 OIT3Q8WWZ8 545 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 DEPDC7Q96QD5 511 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 TAAR9Q96RI9 348 aa11.12□□□□□ -0.63
HDAC6-230ENST00000488543 MEPEQ9NQ76 525 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms