RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 H3F3AP84243 136 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 SMU1Q2TAY7 513 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 ARFGAP2Q8N6H7 521 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 OR8J2Q8NGG1 315 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 OR52E4Q8NGH9 312 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 OR4A15Q8NGL6 344 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 TCP10LQ8TDR4 215 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 RAB8BQ92930 207 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 ROPN1LQ96C74 230 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 ZG16BQ96DA0 208 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 AMBRA1Q9C0C7 1298 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 OR11A1Q9GZK7 315 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 EXOSC3Q9NQT5 275 aaKnown RBP13.31□□□□□ -0.28
NELFA-215ENST00000488452 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.31□□□□□ -0.28
NELFA-215ENST00000488452 TMEM181Q9P2C4 612 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 UPB1Q9UBR1 384 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 DCTN4Q9UJW0 460 aa13.31□□□□□ -0.28
NELFA-215ENST00000488452 PRSS51A0A1B0GVH4 220 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 EIF1BO60739 113 aaKnown RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 SCN2BO60939 215 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 CPSF4O95639 269 aaKnown RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 USF1P22415 310 aaPredicted RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 HTR3AP46098 478 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 IDH2P48735 452 aaKnown RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 SLC35A1P78382 337 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 C1QTNF12Q5T7M4 302 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 ANXA8L1Q5VT79 327 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 TNFAIP8L2Q6P589 184 aaPredicted RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 EMBQ6PCB8 327 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 CASP12Q6UXS9 341 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 FRRS1Q6ZNA5 592 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 RIBC1Q8N443 379 aaPredicted RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 C17orf78Q8N4C9 275 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 C1orf162Q8NEQ5 155 aaPredicted RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.3□□□□□ -0.28
NELFA-215ENST00000488452 PMM1Q92871 262 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 ZIM3Q96PE6 472 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 NAA11Q9BSU3 229 aaPredicted RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 SHARPINQ9H0F6 387 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 AMDHD2Q9Y303 409 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 FLVCR1Q9Y5Y0 555 aa13.3□□□□□ -0.28
NELFA-215ENST00000488452 YLPM1P49750 1951 aaKnown RBP13.3□□□□□ -0.28
NELFA-215ENST00000488452 TMED7-TICAM2A0A0A6YYA0 188 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 ZNF208O43345 1280 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 LMX1BO60663 402 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 BPGMP07738 259 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 NUDT17P0C025 328 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 IGHV4-31P0DP07 118 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 THBS2P35442 1172 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.28
NELFA-215ENST00000488452 TGFBR3Q03167 851 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 FUT5Q11128 374 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 TSPO2Q5TGU0 170 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 C9orf135Q5VTT2 229 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 SAXO2Q658L1 398 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 VPS37AQ8NEZ2 397 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 DPY30Q9C005 99 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 AKTIPQ9H8T0 292 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 SLC7A10Q9NS82 523 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 SLC9A8Q9Y2E8 581 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 TMED7Q9Y3B3 224 aa13.29□□□□□ -0.28
NELFA-215ENST00000488452 PRAMEF27A3QJZ7 478 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 CLDN24A6NM45 220 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 IMPDH2P12268 514 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 KHKP50053 298 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 POLR2HP52434 150 aaKnown RBP13.28□□□□□ -0.28
NELFA-215ENST00000488452 PRPS1P60891 318 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 PHC1P78364 1004 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 SLC25A3Q00325 362 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 SLC17A1Q14916 467 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 GPAT3Q53EU6 434 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 HMGN2P46Q86SG4 172 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 ANKRD46Q86W74 232 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 CNOT9Q92600 299 aaKnown RBP13.28□□□□□ -0.28
NELFA-215ENST00000488452 NEURL3Q96EH8 262 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 LGALS13Q9UHV8 139 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 OSGIN1Q9UJX0 560 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 PLCE1Q9P212 2302 aa13.28□□□□□ -0.28
NELFA-215ENST00000488452 TMEM72A0PK05 275 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 AP3D1O14617 1153 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 LY6HO94772 140 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 WNT11O96014 354 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 ZNF16P17020 682 aaPredicted RBP13.27□□□□□ -0.29
NELFA-215ENST00000488452 TACR3P29371 465 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 MPGP29372 298 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 CHI3L1P36222 383 aaPredicted RBP13.27□□□□□ -0.29
NELFA-215ENST00000488452 GZMKP49863 264 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 PDLIM4P50479 330 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 MAP2K6P52564 334 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 HPCAP84074 193 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 PLAURQ03405 335 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 SWI5Q1ZZU3 235 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 MST1LQ2TV78 715 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 KRTAP24-1Q3LI83 254 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 NUDCD3Q8IVD9 361 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 CMIPQ8IY22 773 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 ARIH2OSQ8N7S6 290 aa13.27□□□□□ -0.29
NELFA-215ENST00000488452 TMEM45BQ96B21 275 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms