RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 IGHV3-9P01782 118 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 ZCCHC18P0CG32 403 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 IMPDH2P12268 514 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 ETFAP13804 333 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 TACR3P29371 465 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 SLC1A3P43003 542 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 MAGEA8P43361 318 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 POLR2HP52434 150 aaKnown RBP17.06■□□□□ 0.32
CD55-209ENST00000488171 OR2B6P58173 313 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 EPS8Q12929 822 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 PPA1Q15181 289 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 GTDC1Q4AE62 458 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 FBXW9Q5XUX1 488 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 ZNF433Q8N7K0 673 aaPredicted RBP17.06■□□□□ 0.32
CD55-209ENST00000488171 KBTBD8Q8NFY9 601 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 OR9I1Q8NGQ6 314 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 FBXW5Q969U6 566 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 RLIMQ9NVW2 624 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 ZC3H12DA2A288 527 aaKnown RBP17.05■□□□□ 0.32
CD55-209ENST00000488171 CFAP73A6NFT4 308 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 FAM171A2A8MVW0 826 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 KLF11O14901 512 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 SMAD7O15105 426 aaKnown RBP17.05■□□□□ 0.32
CD55-209ENST00000488171 ERLIN1O75477 346 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 SOD3P08294 240 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 DANCRP0C864 163 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 GGT1P19440 569 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 GNA13Q14344 377 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 ZNF672Q499Z4 452 aaPredicted RBP17.05■□□□□ 0.32
CD55-209ENST00000488171 TIMM23BQ5SRD1 257 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 VRK2Q86Y07 508 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 PEX5LQ8IYB4 626 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 APH1AQ96BI3 265 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 DDIT4LQ96D03 193 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 AURKBQ96GD4 344 aaPredicted RBP17.05■□□□□ 0.32
CD55-209ENST00000488171 ADAM19Q9H013 955 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 TPT1P8Q9HAU6 139 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 NPAP1Q9NZP6 1156 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 P2RX2Q9UBL9 471 aa17.05■□□□□ 0.32
CD55-209ENST00000488171 CDHR4A6H8M9 788 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 OR5H1A6NKK0 313 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 OVOL3O00110 214 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 GPR171O14626 319 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 UBDO15205 165 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 TFPTP0C1Z6 253 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 CRATP43155 626 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 POLR2JP52435 117 aaKnown RBP17.04■□□□□ 0.32
CD55-209ENST00000488171 ATP5J2P56134 94 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 RPS4XP62701 263 aaKnown RBP17.04■□□□□ 0.32
CD55-209ENST00000488171 ZNF836Q6ZNA1 936 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 MSANTD1Q6ZTZ1 278 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 P2RY8Q86VZ1 359 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 UBE2J2Q8N2K1 259 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 OR52P1PQ8NH57 321 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 SLC38A5Q8WUX1 472 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 VPS33AQ96AX1 596 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 TRIM2Q9C040 744 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 RMND5AQ9H871 391 aa17.04■□□□□ 0.32
CD55-209ENST00000488171 ANP32DO95626 131 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 BCHEP06276 602 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 GKN3PP0CG01 181 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 ACAA2P42765 397 aaKnown RBP17.03■□□□□ 0.32
CD55-209ENST00000488171 DSTNP60981 165 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 SLC35A1P78382 337 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 PGGHGQ32M88 737 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 ZNF440Q8IYI8 595 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 SMAP2Q8WU79 429 aaPredicted RBP17.03■□□□□ 0.32
CD55-209ENST00000488171 MUCL1Q96DR8 90 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 ITCHQ96J02 903 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 CALML5Q9NZT1 146 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 MALT1Q9UDY8 824 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 CHST2Q9Y4C5 530 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 MAGED1Q9Y5V3 778 aaPredicted RBP17.03■□□□□ 0.32
CD55-209ENST00000488171 USH1CQ9Y6N9 552 aa17.03■□□□□ 0.32
CD55-209ENST00000488171 SHISA9B4DS77 424 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 EIF1BO60739 113 aaKnown RBP17.02■□□□□ 0.32
CD55-209ENST00000488171 MRPL33O75394 65 aaKnown RBP17.02■□□□□ 0.32
CD55-209ENST00000488171 RAD51DO75771 328 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 UQCRBP14927 111 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 MAP2K6P52564 334 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 CRISP3P54108 245 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 FOXG1P55316 489 aaPredicted RBP17.02■□□□□ 0.32
CD55-209ENST00000488171 LIN52Q52LA3 116 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 RPS26P11Q5JNZ5 115 aaPredicted RBP17.02■□□□□ 0.32
CD55-209ENST00000488171 EPGNQ6UW88 154 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 SSX8Q7RTT4 187 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 MIER2Q8N344 545 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 ASB6Q9NWX5 421 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 ZNF443Q9Y2A4 671 aaPredicted RBP17.02■□□□□ 0.32
CD55-209ENST00000488171 FLVCR1Q9Y5Y0 555 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 USF3Q68DE3 2245 aa17.02■□□□□ 0.32
CD55-209ENST00000488171 FAM234BA2RU67 622 aa17.02■□□□□ 0.31
CD55-209ENST00000488171 FAPQ12884 760 aa17.02■□□□□ 0.31
CD55-209ENST00000488171 SLC17A1Q14916 467 aa17.02■□□□□ 0.31
CD55-209ENST00000488171 C6orf10Q5SRN2 563 aa17.02■□□□□ 0.31
CD55-209ENST00000488171 RNF220Q5VTB9 566 aa17.02■□□□□ 0.31
CD55-209ENST00000488171 PAQR6Q6TCH4 344 aa17.02■□□□□ 0.31
CD55-209ENST00000488171 CLIP4Q8N3C7 705 aa17.02■□□□□ 0.31
CD55-209ENST00000488171 GTF2H4Q92759 462 aa17.02■□□□□ 0.31
CD55-209ENST00000488171 TMEM19Q96HH6 336 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms