RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	OR5H1	A6NKK0	313 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	ZNF716	A6NP11	495 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	OVOL3	O00110	214 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	ATP8B1	O43520	1251 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	SNN	O75324	88 aa	Predicted RBP	10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	PGM3	O95394	542 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	ANP32D	O95626	131 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	COX5A	P20674	150 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	TACR3	P29371	465 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	CRAT	P43155	626 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	MAP2K6	P52564	334 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	MAGOH	P61326	146 aa	Known RBP	10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	PPP2R2B	Q00005	443 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	FAP	Q12884	760 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	TNK1	Q13470	666 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	ETFDH	Q16134	617 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	GSTA3	Q16772	222 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	CLEC12B	Q2HXU8	276 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	PDCD4	Q53EL6	469 aa	Known RBP	10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	KLHL17	Q6TDP4	642 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	ATG4D	Q86TL0	474 aa	Predicted RBP	10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	KBTBD8	Q8NFY9	601 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	RADIL	Q96JH8	1075 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	TRIM2	Q9C040	744 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	ALG2	Q9H553	416 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	RMND5A	Q9H871	391 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	MANSC1	Q9H8J5	431 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	FAIM	Q9NVQ4	179 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	ASB6	Q9NWX5	421 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	CISD1	Q9NZ45	108 aa	Known RBP	10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	CALML5	Q9NZT1	146 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	P2RX2	Q9UBL9	471 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	OSGIN1	Q9UJX0	560 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	MED12L	Q86YW9	2145 aa		10.99	□□□□□ -0.65
SREBF1-215	ENST00000487401	TMEM72	A0PK05	275 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	TMEM247	A6NEH6	219 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	FAAH	O00519	579 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	ABCD4	O14678	606 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	RAMP1	O60894	148 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	ADAM11	O75078	769 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	RAD51D	O75771	328 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	DANCR	P0C864	163 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	CXCR1	P25024	350 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	SLC16A1	P53985	500 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	SLC18A1	P54219	525 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	CDH11	P55287	796 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	COPZ1	P61923	177 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	PLAUR	Q03405	335 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	GABPB1	Q06547	395 aa	Predicted RBP	10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	EPS8	Q12929	822 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	VEZF1	Q14119	521 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	LIN52	Q52LA3	116 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	MRPL2	Q5T653	305 aa	Known RBP	10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	OR7E24	Q6IFN5	339 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	SEZ6L2	Q6UXD5	910 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	TMEM108	Q6UXF1	575 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	CASP12	Q6UXS9	341 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	OR52N5	Q8NH56	324 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	OR52P1P	Q8NH57	321 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	ITCH	Q96J02	903 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	ZNF446	Q9NWS9	450 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	TAS2R16	Q9NYV7	291 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	ZIM2	Q9NZV7	527 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	UPB1	Q9UBR1	384 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	PRDM4	Q9UKN5	801 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	ZNF232	Q9UNY5	417 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	MGAT4B	Q9UQ53	548 aa		10.98	□□□□□ -0.65
SREBF1-215	ENST00000487401	UBD	O15205	165 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	ERLIN1	O75477	346 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	IMPDH2	P12268	514 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	ETFA	P13804	333 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	RPS4Y1	P22090	263 aa	Known RBP	10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	CDKN1A	P38936	164 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	ZNF83	P51522	516 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	CRISP3	P54108	245 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	H3F3A	P84243	136 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	LARS2	Q15031	903 aa	Known RBP	10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	ZSWIM7	Q19AV6	140 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	PGGHG	Q32M88	737 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	SLC9B1	Q4ZJI4	515 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	AGAP6	Q5VW22	663 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	VRK2	Q86Y07	508 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	DEPDC4	Q8N2C3	294 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	CADM2	Q8N3J6	435 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	HS6ST2	Q96MM7	605 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	ADAM19	Q9H013	955 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	ARMC7	Q9H6L4	198 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	TPT1P8	Q9HAU6	139 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	BARX1	Q9HBU1	254 aa	Predicted RBP	10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	RLIM	Q9NVW2	624 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	THUMPD1	Q9NXG2	353 aa	Known RBP	10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	NPAP1	Q9NZP6	1156 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	POU2F3	Q9UKI9	436 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	SLC9A8	Q9Y2E8	581 aa		10.97	□□□□□ -0.65
SREBF1-215	ENST00000487401	ZC3H12D	A2A288	527 aa	Known RBP	10.96	□□□□□ -0.65
SREBF1-215	ENST00000487401	SHISA9	B4DS77	424 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms